| Correction to: Economic evaluation of the effect of needle and syringe programs on skin, soft tissue, and vascular infections in people who inject drugs: a microsimulation modelling approach (Harm Reduction Journal, (2024), 21, 1, (126), 10.1186/s12954-024-01037-3) |
David Buckeridge
|
Harm Reduction Journal |
| A Joint Temporal Model for Hospitalizations and ICU Admissions Due to COVID-19 in Quebec |
David Buckeridge
|
Stat |
| Antibiotic prophylaxis for the prevention of surgical site infections following colorectal surgery: protocol for network meta-analysis of randomized trials |
Mark Loeb
|
Systematic Reviews |
| Canadian health care providers' and education workers' hesitance to receive original and bivalent COVID-19 vaccines |
Mark Loeb
|
Vaccine |
| Community masking for prevention of respiratory infections: wider evidence base |
David Fisman
|
BMJ (Clinical research ed.) |
| The contributions of fertility during adolescence to disability across the life-course: hypothesized causal pathways, research gaps, and future directions |
Diego Bassani
|
Annals of Human Biology |
| The political economy of epidemic management |
Troy Day
|
Review of Economic Design |
| The Clinical Severity of COVID-19 Variants of Concern: Retrospective Population-Based Analysis |
Naveed Janjua,
Sharmistha Mishra,
Natalie Prystajecky
|
JMIR public health and surveillance |
| Development of a Framework for Establishing 'Gold Standard' Outbreak Data from Submitted SARS-CoV-2 Genome Samples |
David Buckeridge
|
Studies in health technology and informatics |
| Seroprevalence of SARS-CoV-2 antibodies among children receiving primary care in Toronto, Ontario |
Ashleigh Tuite
|
Canadian Journal of Public Health |
| Diversity gaps among practicing ophthalmologists in Canada: a landscape study |
Shelby Sturrock
|
Canadian Journal of Ophthalmology |
| Extent and socioeconomic correlates of small area variations in life expectancy in Canada and the United States |
Michael Wolfson
|
Health reports |
| Level of patient contact and Impact of Event scores among Canadian healthcare providers during the COVID-19 pandemic |
Mark Loeb
|
BMC Health Services Research |
| Population immunity to varicella in Canada: A Canadian Immunization Research Network (CIRN) study |
Marc Brisson
|
PLoS ONE |
| Spatial kinetics and immune control of murine cytomegalovirus infection in the salivary glands |
Daniel Coombs
|
PLoS Computational Biology |
| Crowdfunding for Complementary and Alternative Cancer Treatments in Tijuana, Mexico: Content Analysis |
Timothy Caulfield
|
JMIR Cancer |
| Population size, HIV prevalence, and antiretroviral therapy coverage among key populations in sub-Saharan Africa: collation and synthesis of survey data, 2010–23 |
Mathieu Maheu-Giroux
|
The Lancet Global Health |
| Characterizing primary care patients with posttraumatic stress disorder using electronic medical records: a retrospective cross-sectional study |
Tyler Williamson
|
Family Practice |
| WHO global research priorities for antimicrobial resistance in human health |
Mark Loeb
|
The Lancet Microbe |
| Screening and Diagnosis of Chronic Kidney Disease in Adults Living With Diabetes: A Retrospective Cohort Study Using the Canadian Primary Care Sentinel Surveillance Network |
Tyler Williamson
|
Canadian Journal of Diabetes |
| An early warning indicator trained on stochastic disease-spreading models with different noises |
Mark Lewis
|
Journal of the Royal Society Interface |
| Effects of storage conditions on the microbiota of fecal samples collected from dairy cattle |
Javier Sanchez
|
PLoS ONE |
| Surgeon- and hospital-level variation in wait times for scheduled non-urgent surgery in Ontario, Canada: A cross-sectional population-based study |
Dionne Aleman
|
PLoS ONE |
| Predicting major clinical events among Canadian adults with laboratory-confirmed influenza infection using the influenza severity scale |
Mark Loeb
|
Scientific Reports |
| Improving Transparency of Decision Models Through the Application of Decision Analytic Models with Omitted Objects Displayed (DAMWOOD) |
Christopher McCabe,
Jeff Round
|
PharmacoEconomics |
| Health and non-health benefits and equity impacts of individual-level economic relief programs during epidemics/pandemics in high income settings: a scoping review |
Sharmistha Mishra
|
BMC Public Health |
| Impact of waning immunity against SARS-CoV-2 severity exacerbated by vaccine hesitancy |
Caroline Wagner
|
PLoS Computational Biology |
| Essential Number of Principal Components and Nearly Training-Free Model for Spectral Analysis |
Xuekui Zhang
|
IEEE Transactions on Pattern Analysis and Machine Intelligence |
| COVID-19 vaccine effectiveness among South Asians in Canada |
Mark Loeb
|
PLOS Global Public Health |
| Global prevalence of non-partner sexual violence against women |
Mathieu Maheu-Giroux
|
Bulletin of the World Health Organization |
| Bridging Hepatitis C Care Gaps: A Modeling Approach for Achieving the WHO’s Targets in Ontario, Canada |
Naveed Janjua
|
Viruses |
| Cost-effectiveness of RSVpreF vaccine and nirsevimab for the prevention of respiratory syncytial virus disease in Canadian infants |
Ashleigh Tuite
|
Vaccine |
| Intimate partner violence against adolescent girls: regional and national prevalence estimates and associated country-level factors |
Mathieu Maheu-Giroux
|
The Lancet Child and Adolescent Health |
| The role of influenza Hemagglutination-Inhibition antibody as a vaccine mediator in children |
Mark Loeb
|
Vaccine |
| eMPower: An online Mind-body wellness Program for adults living with chronic health conditions: A three-armed randomized controlled trial protocol |
Jeff Round
|
Contemporary Clinical Trials |
| Canada’s provincial COVID-19 pandemic modelling efforts: A review of mathematical models and their impacts on the responses |
Caroline Colijn,
David Earn,
Amy Hurford,
Naveed Janjua,
Mathieu Maheu-Giroux,
Sharmistha Mishra,
Tyler Williamson
|
Canadian Journal of Public Health |
| Wastewater-based surveillance of SARS-CoV-2: Short-term projection (forecasting), smoothing and outlier identification using Bayesian smoothing |
Doug Manuel
|
Science of the Total Environment |
| COVID-19 data and modeling: We need to learn from and act on our experiences |
Michael Wolfson
|
Canadian Journal of Public Health |
| Fitting Epidemic Models to Data: A Tutorial in Memory of Fred Brauer |
Benjamin Bolker,
David Earn
|
Bulletin of Mathematical Biology |
| Adherence of SARS-CoV-2 Seroepidemiologic Studies to the ROSES-S Reporting Guideline During the COVID-19 Pandemic |
Tyler Williamson
|
Influenza and other Respiratory Viruses |
| The majority of Canadians likely behaved as myopic rationalists rather than success-based learners when deciding on their first dose of COVID-19 vaccine |
Mark Lewis
|
Frontiers in Public Health |
| Childcare use and the social-emotional and behavioural outcomes of late-preterm and early-term born children at age 5: An analysis of the All Our Families longitudinal cohort |
Tyler Williamson
|
Canadian Journal of Public Health |
| The contribution of intimate partner violence to vertical HIV transmission: a modelling analysis of 46 African countries |
Mathieu Maheu-Giroux
|
The Lancet HIV |
| UNIFORM ASYMPTOTIC APPROXIMATIONS FOR THE PHASE PLANE TRAJECTORIES OF THE SIR MODEL WITH VITAL DYNAMICS |
David Earn
|
SIAM Journal on Applied Mathematics |
| Cost-effectiveness analysis of community-led HIV self-testing among key populations in Côte d'Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
Journal of the International AIDS Society |
| The short-term effect of nitrogen on freshwater cyanobacteria and cyanotoxins |
Jesse Shapiro
|
Frontiers in Water |
| The population-level impact of introducing rapid diagnostic tests on syphilis transmission in Canadian arctic communities – a mathematical modeling study |
Mathieu Maheu-Giroux
|
The Lancet Regional Health - Americas |
| Optimal human papillomavirus vaccination strategies in the context of vaccine supply constraints in 100 countries |
Marc Brisson
|
eClinicalMedicine |
| Ecological determinants of leishmaniasis vector, Lutzomyia spp.: A scoping review |
Amy Greer
|
Medical and Veterinary Entomology |
| Case-cohort design as an efficient approach to evaluating COVID-19 vaccine effectiveness, waning, heterologous immune effect and optimal dosing interval |
David Fisman,
Ashleigh Tuite
|
Vaccine |
| Effectiveness of smoking cessation interventions among adults: an overview of systematic reviews |
Doug Manuel
|
Systematic Reviews |
| Coronavirus disease 2019 outcomes in a population-based cohort of people with HIV and a matched cohort of people without HIV during Omicron variant waves |
Naveed Janjua
|
AIDS |
| A global initiative to deliver precision health in diabetes |
Doug Manuel
|
Nature Medicine |
| Contextual factors influencing implementation of HIV treatment support strategies for female sex workers living with HIV in South Africa: A qualitative analysis using the Consolidated Framework for Implementation Research |
Sharmistha Mishra
|
Journal of Acquired Immune Deficiency Syndromes |
| Canada’s approach to SARS-CoV-2 sero-surveillance: Lessons learned for routine surveillance and future pandemics |
David Buckeridge
|
Canadian Journal of Public Health |
| Development of an age-adjusted, activity-based contact probability model for infectious diseases |
Lisa Kanary,
Sara McPhee-Knowles
|
Facets |
| High prevalence of SARS-CoV-2 antibodies and low prevalence of SARS-CoV-2 RNA in cats recently exposed to human cases |
Natalie Prystajecky
|
BMC Veterinary Research |
| Optimal design of vaccination policies: A case study for Newfoundland and Labrador |
Dionne Aleman
|
Operations Research Letters |
| Potential population-level effects of HIV self-test distribution among key populations in Côte d'Ivoire, Mali, and Senegal: a mathematical modelling analysis |
Mathieu Maheu-Giroux
|
The Lancet HIV |
| Describing the effect of COVID-19 on sexual and healthcare-seeking behaviours of men who have sex with men in three counties in Kenya: A cross-sectional study |
Sharmistha Mishra
|
Sexually Transmitted Infections |
| The impact of past HIV interventions and diagnosis gaps on new HIV acquisitions, transmissions, and HIV-related deaths in Côte d'Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
AIDS |
| Effectiveness of e-cigarettes as a stop smoking intervention in adults: a systematic review |
Doug Manuel
|
Systematic Reviews |
| Re-Purposing the Ordering of Routine Laboratory Tests in Hospitalized Medical Patients (RePORT): protocol for a multicenter stepped-wedge cluster randomised trial to evaluate the impact of a multicomponent intervention bundle to reduce laboratory test over-utilization |
Tyler Williamson
|
Implementation Science |
| Economic evaluation of the effect of needle and syringe programs on skin, soft tissue, and vascular infections in people who inject drugs: a microsimulation modelling approach |
David Buckeridge
|
Harm Reduction Journal |
| Association of hepatitis B virus treatment with all-cause and liver-related mortality among individuals with HBV and cirrhosis: a population-based cohort study |
Naveed Janjua
|
The Lancet Regional Health - Americas |
| Biosecurity perceptions among Ontario horse owners during the COVID-19 pandemic |
Amy Greer
|
Equine Veterinary Journal |
| Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19: Serologic Testing (September 2020) |
Mark Loeb
|
Clinical Infectious Diseases |
| The Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19: Antigen Testing (June 2021) |
Mark Loeb
|
Clinical Infectious Diseases |
| Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19 (June 2020) |
Mark Loeb
|
Clinical Infectious Diseases |
| The Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19: Antigen Testing (January 2023) |
Mark Loeb
|
Clinical Infectious Diseases |
| Rapid Guidelines to Address the Changing COVID-19 Pandemic |
Mark Loeb
|
Clinical Infectious Diseases |
| The Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19: Molecular Diagnostic Testing (December 2023) |
Mark Loeb
|
Clinical Infectious Diseases |
| The Infectious Diseases Society of America Guidelines on the Diagnosis of COVID-19: Molecular Diagnostic Testing (January 2021) |
Mark Loeb
|
Clinical Infectious Diseases |
| Exploring perceptions of online calculators for identifying community-dwelling older people at risk of dying: A qualitative study |
Doug Manuel
|
PEC Innovation |
| Challenges and Opportunities in Big Data Science to Address Health Inequities and Focus the HIV Response |
Sharmistha Mishra
|
Current HIV/AIDS Reports |
| Vibrio cholerae O1 experiences mild bottlenecks through the gastrointestinal tract in some but not all cholera patients |
Jesse Shapiro
|
Microbiology Spectrum |
| Impact of COVID-19 pandemic on hepatocellular carcinoma surveillance in British Columbia, Canada: An interrupted time series study |
Naveed Janjua
|
Journal of Viral Hepatitis |
| Is SARS-CoV-2 elimination or mitigation best? Regional and disease characteristics determine the recommended strategy |
Julien Arino,
Amy Hurford
|
Royal Society Open Science |
| Planting long-lived trees in a warming climate: Theory shows the importance of stage-dependent climatic tolerance |
Sarah Otto
|
Evolutionary Applications |
| Evaluating infectious disease outbreak potential and mitigation effectiveness on cruise ships |
Julien Arino
|
Journal of Theoretical Biology |
| HIV self-testing positivity rate and linkage to confirmatory testing and care: a telephone survey in Côte d’Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
Peer Community Journal |
| Multimodel Approaches Are Not the Best Way to Understand Multifactorial Systems |
Benjamin Bolker
|
Entropy |
| Prevalence, Determinants, and Trends in the Experience and Perpetration of Intimate Partner Violence Among a Cohort of Gay, Bisexual, and Other Men Who Have Sex with Men in Montréal, Toronto, and Vancouver, Canada (2017–2022) |
Mathieu Maheu-Giroux
|
LGBT Health |
| Temporal trends in disparities in COVID-19 seropositivity among Canadian blood donors |
David Buckeridge
|
International Journal of Epidemiology |
| The economic rationale for cell-based influenza vaccines in children and adults: A review of cost-effectiveness analyses |
David Fisman
|
Human Vaccines and Immunotherapeutics |
| AGO, a Framework for the Reconstruction of Ancestral Syntenies and Gene Orders |
Cedric Chauve
|
Methods in Molecular Biology |
| Public transit mobility as a leading indicator of COVID-19 transmission in 40 cities during the first wave of the pandemic |
David Fisman,
Shelby Sturrock
|
PeerJ |
| Empiric antibiotic regimens in adults with non-ventilator-associated hospital-acquired pneumonia: a systematic review and network meta-analysis of randomized controlled trials |
Mark Loeb
|
Clinical Microbiology and Infection |
| Utilization of early supported discharge and outpatient rehabilitation services following inpatient stroke rehabilitation |
Jeff Round
|
Archives of Public Health |
| Endemic does not mean constant as SARS-CoV-2 continues to evolve |
Caroline Colijn,
Sarah Otto
|
Evolution |
| The association between alcohol retail access and health care visits attributable to alcohol for individuals with and without a history of alcohol-related health-care use |
Doug Manuel
|
Addiction |
| Performance and Cost-Efficiency of Single Hormonal Treatment Protocols in Tropical Anestrous Dairy Cows |
Javier Sanchez
|
Animals |
| Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data |
Jesse Shapiro
|
Microbial Genomics |
| Estimating the total utilization of take home naloxone during an unregulated drug toxicity crisis: A Bayesian modeling approach |
Daniel Coombs
|
International Journal of Drug Policy |
| Long-Term Health-Related Quality of Life in Working-Age COVID-19 Survivors: A Cross-Sectional Study |
Naveed Janjua
|
American Journal of Medicine |
| Inverse Problems for Physics-Based Process Models |
Donald Estep
|
Annual Review of Statistics and Its Application |
| Masks and respirators for prevention of respiratory infections: a state of the science review |
David Fisman
|
Clinical Microbiology Reviews |
| Incubation Period and Serial Interval of Mpox in 2022 Global Outbreak Compared with Historical Estimates |
Jonathan Dushoff
|
Emerging Infectious Diseases |
| The HIV response beyond 2030: preparing for decades of sustained HIV epidemic control in eastern and southern Africa |
Sharmistha Mishra
|
The Lancet |
| Modelling daisy quorum drive: A short-term bridge across engineered fitness valleys |
Sarah Otto
|
PLoS Genetics |
| SARS-CoV-2 Surveillance of Wild Mice and Rats in North American Cities |
Natalie Prystajecky
|
EcoHealth |
| Revealing Decision-Making Strategies of Americans in Taking COVID-19 Vaccination |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Clinical significance of cefazolin inoculum effect in serious MSSA infections: a systematic review |
Mark Loeb
|
JAC-Antimicrobial Resistance |
| Treatment Planning Methods for Dose Painting by Numbers Treatment in Gamma Knife Radiosurgery |
Dionne Aleman
|
Advances in Radiation Oncology |
| Shifting transmission patterns of human mpox in South Kivu, DR Congo |
Mark Loeb
|
The Lancet Infectious Diseases |
| Corrigendum to “Fixation and effective size in a haploid–diploid population with asexual reproduction” [Theoretical Population Biology 143 (2022) 30–45, (S0040580921000769), (10.1016/j.tpb.2021.11.002)] |
Sarah Otto
|
Theoretical Population Biology |
| Temporal and spatial variation of domoic acid along Canada's coast |
Xuekui Zhang
|
Science of the Total Environment |
| An individual-based movement model for contacts between mule deer (Odocoileus hemionus) |
Mark Lewis
|
Ecological Complexity |
| Ascertaining the Francophone population in Ontario: validating the language variable in health data |
Doug Manuel
|
BMC Medical Research Methodology |
| Trends in Cardiovascular Risk Factors in Canada: Variation by Migration and Temporal Factors, 2001-2018 |
Doug Manuel
|
CJC Open |
| Risk of Major Adverse Cardiovascular Events After SARS-CoV-2 Infection in British Columbia: A Population-Based Study |
Naveed Janjua
|
American Journal of Medicine |
| Impact of the COVID-19 Pandemic on Hepatitis C Treatment Initiation in British Columbia, Canada: An Interrupted Time Series Study |
Naveed Janjua
|
Viruses |
| Phage predation, disease severity, and pathogen genetic diversity in cholera patients |
Jesse Shapiro
|
Science (New York, N.Y.) |
| Comparing Contact Tracing Through Bluetooth and GPS Surveillance Data: Simulation-Driven Approach |
Nathaniel Osgood
|
Journal of medical Internet research |
| Differential Burden of HIV among Adolescent Girls and Young Women by Places Associated with Sex Work: An Observational Study in Mombasa, Kenya |
Sharmistha Mishra
|
Journal of Acquired Immune Deficiency Syndromes |
| Longitudinal study of paralytic shellfish toxins along Canada's coast |
Xuekui Zhang
|
Environmental Research |
| Efficacy and immunogenicity of a single dose of human papillomavirus vaccine compared to multidose vaccination regimens or no vaccination: An updated systematic review of evidence from clinical trials |
Marc Brisson
|
Vaccine: X |
| Author Reply |
Christopher McCabe,
Jeff Round
|
Value in Health |
| The equitable impact of sugary drink taxation structures on sugary drink consumption among Canadians: a modelling study using the 2015 Canadian Community Health Survey-Nutrition |
Doug Manuel
|
Public Health Nutrition |
| A simulation study of sampling in difficult settings: Statistical superiority of a little-used method |
Benjamin Bolker
|
Statistical Journal of the IAOS |
| Dynamics of collective cooperation under personalised strategy updates |
Sean Cornelius
|
Nature Communications |
| Geographical variation in medication and health resource use in multiple sclerosis |
Tyler Williamson
|
Canadian Journal of Neurological Sciences |
| Examining the effects of voluntary avoidance behaviour and policy-mediated behaviour change on the dynamics of SARS-CoV-2: A mathematical model |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Infectious Disease Modelling |
| Sex and gender differences in hepatitis C virus risk, prevention, and cascade of care in people who inject drugs: systematic review and meta-analysis |
Mathieu Maheu-Giroux
|
eClinicalMedicine |
| Capturing Valuation Study Sampling Uncertainty in the Estimation of Health State Utility Values Using the EQ-5D-3L |
Jeff Round
|
Medical Decision Making |
| Segmentation of patients with small cell lung cancer into responders and non-responders using the optimal cross-validation technique |
Xuekui Zhang
|
BMC Medical Research Methodology |
| The recent rapid expansion of multidrug resistant Ural lineage Mycobacterium tuberculosis in Moldova |
Caroline Colijn
|
Nature Communications |
| Interventions on gender equity in the workplace: a scoping review |
Christopher McCabe
|
BMC Medicine |
| Impact of immune evasion, waning and boosting on dynamics of population mixing between a vaccinated majority and unvaccinated minority |
David Fisman,
Ashleigh Tuite
|
PLoS ONE |
| A Dynamic Model of Opioid Overdose Deaths in Canada during the Co-Occurring Opioid Overdose Crisis and COVID-19 Pandemic |
Nathaniel Osgood
|
International Journal of Environmental Research and Public Health |
| Bone-anchored prostheses for transfemoral amputation: a systematic review of outcomes, complications, patient experiences, and cost-effectiveness |
Jeff Round
|
Frontiers in Rehabilitation Sciences |
| Characteristics of the Sexual Networks of Men Who Have Sex With Men in Montréal, Toronto, and Vancouver: Insights from Canada’s 2022 Mpox Outbreak |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of Infectious Diseases |
| Preparing for Mpox Resurgence: Surveillance Lessons From Outbreaks in Toronto, Canada |
Sharmistha Mishra
|
Journal of Infectious Diseases |
| BAND: Biomedical Alert News Dataset |
David Buckeridge
|
Proceedings of the AAAI Conference on Artificial Intelligence |
| Validation of case-ascertainment algorithms using health administrative data to identify people who inject drugs in Ontario, Canada |
Naveed Janjua
|
Journal of Clinical Epidemiology |
| Physical dose validation of dynamic treatment for Gamma Knife radiosurgery |
Dionne Aleman
|
Medical Physics |
| Post-stroke care pathways and spasticity treatment: a retrospective study in Alberta |
Tyler Williamson
|
Canadian Journal of Neurological Sciences |
| The centre for health informatics: a novel approach to accelerating the field of health data science |
Tyler Williamson
|
International Journal of Population Data Science |
| Do preinjury life events moderate the outcomes of mild traumatic brain injuries in children? An A-CAP Study |
Tyler Williamson
|
Journal of Pediatric Psychology |
| Performance of HCV core antigen and PCR testing in a predominantly genotype 3 population |
Naveed Janjua
|
Journal of Viral Hepatitis |
| How can we enhance crops with flowers to increase pollination services and stop bee decline? |
Rebecca Tyson
|
Agriculture, Ecosystems and Environment |
| The prokaryotic and eukaryotic microbiome of Pacific oyster spat is shaped by ocean warming but not acidification |
Sarah Otto
|
Applied and Environmental Microbiology |
| Evidence with 95-95-95 that ambitious is feasible |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
The Lancet HIV |
| Human Factor Health Data Interoperability |
Tyler Williamson
|
Healthcare Papers |
| Impact of new direct-acting antiviral therapy on the prevalence and undiagnosed proportion of chronic hepatitis C infection |
Naveed Janjua
|
Liver International |
| Snapshot of cyanobacterial toxins in Pakistani freshwater bodies |
Jesse Shapiro
|
Environmental Science and Pollution Research |
| Ongoing Gaps in the Hepatitis C Care Cascade during the Direct-Acting Antiviral Era in a Large Retrospective Cohort in Canada: A Population-Based Study |
Naveed Janjua
|
Viruses |
| Effects of group size and population size on the evolutionary stability of cooperation |
David Earn
|
Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences |
| Visible minority status and occupation were associated with increased COVID-19 infection in Greater Vancouver British Columbia between June and November 2020: an ecological study |
Naveed Janjua
|
Frontiers in Public Health |
| Evaluation of an automated feedback intervention to improve antibiotic prescribing among primary care physicians (OPEN Stewardship): a multinational controlled interrupted time-series study |
David Fisman
|
Microbiology Spectrum |
| Association of maternal, obstetric, fetal, and neonatal mortality outcomes with Lady Health Worker coverage from a cross-sectional survey of >10,000 households in Gilgit-Baltistan, Pakistan |
Diego Bassani
|
PLOS Global Public Health |
| Nasopharyngeal angiotensin converting enzyme 2 (ACE2) expression as a risk-factor for SARS-CoV-2 transmission in concurrent hospital associated outbreaks |
Natalie Prystajecky
|
BMC Infectious Diseases |
| Estimated mortality risk and use of palliative care services among home care clients during the last 6 months of life: a retrospective cohort study |
Doug Manuel
|
CMAJ. Canadian Medical Association Journal |
| Risk of Severe COVID-19-Related Outcomes among Patients with Cirrhosis: A Population-Based Cohort Study in Canada |
Naveed Janjua
|
Viruses |
| Hepatitis C Attributable Healthcare Costs and Mortality among Immigrants: A Population-Based Matched Cohort Study |
Naveed Janjua
|
Canadian Journal of Gastroenterology and Hepatology |
| Impact of community mask mandates on SARS-CoV-2 transmission in Ontario after adjustment for differential testing by age and sex |
David Fisman,
Ashleigh Tuite
|
PNAS Nexus |
| Weakly nonlinear analysis of a two-species non-local advection–diffusion system |
Mark Lewis
|
Nonlinear Analysis: Real World Applications |
| Protection of prior SARS-CoV-2 infection, COVID-19 boosters, and hybrid immunity against Omicron severe illness: A population-based cohort study of five million residents in Canada |
Sharmistha Mishra
|
PLoS ONE |
| Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report |
Julien Arino
|
Infectious Disease Modelling |
| Intra-Host Evolution Analyses in an Immunosuppressed Patient Supports SARS-CoV-2 Viral Reservoir Hypothesis |
Sandrine Moreira
|
Viruses |
| Longitudinal Analysis of Mpox Virus DNA Detectability From Multiple Specimen Types During Acute Illness: A Cohort Study |
Sharmistha Mishra
|
Open Forum Infectious Diseases |
| Cohort profile: the British Columbia COVID-19 Cohort (BCC19C)—a dynamic, linked population-based cohort |
Naveed Janjua
|
Frontiers in Public Health |
| Estimating the mortality risk correcting for high loss to follow-up among female sex workers with HIV in Durban, South Africa, 2018-2021 |
Sharmistha Mishra
|
Annals of Epidemiology |
| A multiprovincial retrospective analysis of the incidence of myocarditis or pericarditis after mRNA vaccination compared to the incidence after SARS-CoV-2 infection |
Naveed Janjua
|
Heliyon |
| More Than a Decade Since the Latest CONSORT Non-inferiority Trials Extension: Do Infectious Diseases Trials Do Enough? |
Mark Loeb
|
Clinical Infectious Diseases |
| CODA: an open-source platform for federated analysis and machine learning on distributed healthcare data |
David Buckeridge
|
Journal of the American Medical Informatics Association |
| An Evaluation of the Impact of an OPEN Stewardship Generated Feedback Intervention on Antibiotic Prescribing among Primary Care Veterinarians in Canada and Israel |
David Fisman,
Amy Greer
|
Animals |
| Ethnic Disparities in COVID-19 Vaccine Mistrust and Receipt in British Columbia, Canada: Population Survey |
Naveed Janjua
|
JMIR public health and surveillance |
| When and how can we predict adaptive responses to climate change? |
Sarah Otto
|
Evolution Letters |
| On the fast track: hybrids adapt more rapidly than parental populations in a novel environment |
Sarah Otto
|
Evolution Letters |
| The role of vaccine status homophily in the COVID-19 pandemic: a cross-sectional survey with modelling |
Caroline Colijn
|
BMC Public Health |
| Real-time evaluation of signal accuracy in wastewater surveillance of pathogens with high rates of mutation |
Doug Manuel
|
Scientific reports |
| COVID-19 vaccines and adverse events of special interest: A multinational Global Vaccine Data Network (GVDN) cohort study of 99 million vaccinated individuals |
Naveed Janjua
|
Vaccine |
| Forecasting seasonal influenza activity in Canada—Comparing seasonal Auto-Regressive integrated moving average and artificial neural network approaches for public health preparedness |
Amy Greer
|
Zoonoses and Public Health |
| Protocol for the Mpox Prospective Observational Cohort Study (MPOCS) among individuals with mpox in Canada |
Sharmistha Mishra
|
Future Virology |
| WHO's essential medicines and AWaRe: recommendations on first- and second-choice antibiotics for empiric treatment of clinical infections |
Mark Loeb
|
Clinical Microbiology and Infection |
| TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator |
Cedric Chauve
|
Bioinformatics (Oxford, England) |
| Longitudinal changes in brain metabolites following pediatric concussion |
Tyler Williamson
|
Scientific Reports |
| Communicating About Precision Transplantation Tools |
Timothy Caulfield
|
Canadian Journal of Kidney Health and Disease |
| Predicting Imminent Cyanobacterial Blooms in Lakes Using Incomplete Timely Data |
Mark Lewis
|
Water Resources Research |
| Using Exploratory Structural Equation Modeling to Examine Caregiver Distress and Its Contributors |
Doug Manuel
|
Journal of the American Medical Directors Association |
| Real-Time Epidemiology and Acute Care Need Monitoring and Forecasting for COVID-19 via Bayesian Sequential Monte Carlo-Leveraged Transmission Models |
Nathaniel Osgood
|
International journal of environmental research and public health |
| Disease-modifying therapy use and health resource utilisation associated with multiple sclerosis over time: A retrospective cohort study from Alberta, Canada |
Tyler Williamson
|
Journal of the Neurological Sciences |
| Associations among antimicrobial use, calf management practices, and antimicrobial resistance in Escherichia coli from a pooled fecal sample in calves on Canadian dairy farms: A cross-sectional study |
Javier Sanchez
|
Journal of Dairy Science |
| Modelling approaches to borders, geography, and infectious diseases |
David Fisman
|
Pandemics, Public Health, and the Regulation of Borders: Lessons from COVID-19 |
| Examining the Influence of Imbalanced Social Contact Matrices in Epidemic Models |
Sharmistha Mishra
|
American Journal of Epidemiology |
| Rapid, high-throughput, cost-effective whole-genome sequencing of SARS-CoV-2 using a condensed library preparation of the Illumina DNA Prep kit |
Natalie Prystajecky
|
Journal of Clinical Microbiology |
| Enhancing detection of SARS-CoV-2 re-infections using longitudinal sero-monitoring: demonstration of a methodology in a cohort of people experiencing homelessness in Toronto, Canada |
Sharmistha Mishra
|
BMC Infectious Diseases |
| Mutualism at the leading edge: insights into the eco-evolutionary dynamics of host-symbiont communities during range expansion |
Rebecca Tyson
|
Journal of Mathematical Biology |
| Estimating the population effectiveness of interventions against COVID-19 in France: A modelling study |
David Buckeridge
|
Epidemics |
| Clinical and Socioeconomic Associations With Hospital Days and Emergency Department Visits Among Medically Complex Children: A Retrospective Cohort Study |
Jeff Round
|
Hospital Pediatrics |
| Equitable Allocation of Scarce Resources During the Covid-19 Pandemic: A Case Study for Convalescent Plasma Distribution |
Alexander Rutherford
|
Proceedings - Winter Simulation Conference |
| The probability of epidemic burnout in the stochastic SIR model with vital dynamics |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Proceedings of the National Academy of Sciences of the United States of America |
| Targeted genomic sequencing of avian influenza viruses in wetland sediment from wild bird habitats |
Natalie Prystajecky
|
Applied and Environmental Microbiology |
| Social network risk factors and COVID-19 vaccination: A cross-sectional survey study |
Tyler Williamson
|
Vaccine |
| Modelling disease mitigation at mass gatherings: A case study of COVID-19 at the 2022 FIFA World Cup |
Julien Arino
|
PLoS Computational Biology |
| Mastering percolation-like games with deep learning |
Sean Cornelius
|
Physical Review Research |
| Prospective, clinical comparison of self-collected throat-bilateral nares swabs and saline gargle compared to health care provider collected nasopharyngeal swabs among symptomatic outpatients with potential SARS-CoV-2 infection |
Natalie Prystajecky
|
JAMMI |
| Factors associated with SARS-CoV-2 infection in unvaccinated children and young adults |
Daniel Coombs
|
BMC Infectious Diseases |
| A Bayesian framework for modeling COVID-19 case numbers through longitudinal monitoring of SARS-CoV-2 RNA in wastewater |
Tyler Williamson
|
Statistics in Medicine |
| Risk factors for recognized and unrecognized SARS-CoV-2 infection: a seroepidemiologic analysis of the Prospective Urban Rural Epidemiology (PURE) study |
Mark Loeb
|
Microbiology Spectrum |
| A comprehensive, open-source data model for wastewater-based epidemiology |
Doug Manuel
|
Water science and technology : a journal of the International Association on Water Pollution Research |
| Simultaneous estimation of the temporal and spatial extent of animal migration using step lengths and turning angles |
Mark Lewis
|
Movement Ecology |
| Comparison of Empirically Derived and Model-Based Estimates of Key Population HIV Incidence and the Distribution of New Infections by Population Group in Sub-Saharan Africa |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of Acquired Immune Deficiency Syndromes |
| Temporal Trends and Determinants of HIV Testing at Antenatal Care in Sub-Saharan Africa: A Pooled Analysis of Population-Based Surveys (2005–2021) |
Mathieu Maheu-Giroux
|
Journal of Acquired Immune Deficiency Syndromes |
| Measuring HIV Acquisitions among Partners of Key Populations: Estimates from HIV Transmission Dynamic Models |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of Acquired Immune Deficiency Syndromes |
| Pseudogenes act as a neutral reference for detecting selection in prokaryotic pangenomes |
Jesse Shapiro
|
Nature Ecology and Evolution |
| Longitudinal genomic surveillance of multidrug-resistant Escherichia coli carriage in critical care patients |
Jesse Shapiro
|
Microbiology Spectrum |
| Development and validation of a farm-and province-level swine flow simulation model using discrete events and Ontario swine farm and provincial input data |
Amy Greer
|
Canadian Journal of Veterinary Research |
| Long-Term Dynamics of COVID-19 in a Multi-strain Model |
Caroline Colijn
|
Fields Institute Communications |
| Contact Matrices in Compartmental Disease Transmission Models |
Sharmistha Mishra
|
Fields Institute Communications |
| Agent-Based Modeling and Its Trade-Offs: An Introduction and Examples |
Nathaniel Osgood
|
Fields Institute Communications |
| A Categorical Framework for Modeling with Stock and Flow Diagrams |
Nathaniel Osgood
|
Fields Institute Communications |
| Treatment of HCV with direct-acting antivirals on reducing mortality related to extrahepatic manifestations: a large population-based study in British Columbia, Canada |
Naveed Janjua
|
Lancet Regional Health - Americas |
| Pneumococcal population dynamics: Investigating vaccine-induced changes through multiscale modelling |
Caroline Colijn,
Alexander Rutherford
|
PLoS Computational Biology |
| Early childhood trajectories of domain-specific developmental delay and gestational age at birth: An analysis of the All Our Families cohort |
Tyler Williamson
|
PLoS ONE |
| The portrayal of organ donation on TikTok: A content analysis of popular English-language TikTok videos |
Timothy Caulfield
|
Digital Health |
| Machine Learning Informed Diagnosis for Congenital Heart Disease in Large Claims Data Source |
David Buckeridge
|
JACC: Advances |
| SARS-CoV-2 Incubation Period during Omicron BA.5-Dominant Period, Japan |
Jonathan Dushoff
|
Emerging infectious diseases |
| Pandemic Effect on Healthcare Use and Death in Adults with Epilepsy: A Population Study |
Doug Manuel
|
Canadian Journal of Neurological Sciences |
| Trends in outpatient and inpatient visits for separate ambulatory-care-sensitive conditions during the first year of the COVID-19 pandemic: a province-based study |
Doug Manuel
|
Frontiers in Public Health |
| SARS-CoV-2 Exposures at a Large Gathering Event and Acquisition of COVID-19 in the Post-Vaccination Era: A Randomized Trial Is Possible During the Pandemic |
Mark Loeb
|
Clinical Infectious Diseases |
| Improved vaccine coverage for First Nations children receiving first dose on-reserve: A retrospective cohort study in western Canada |
Larry Svenson
|
BMJ Global Health |
| Medication use of Canadians with chronic obstructive pulmonary disease: A cohort study |
Tyler Williamson
|
BMJ Open Respiratory Research |
| An integrated newborn care kit (iNCK) to save newborn lives and improve health outcomes in Gilgit Baltistan (GB), Pakistan: study protocol for a cluster randomized controlled trial |
Diego Bassani
|
BMC Public Health |
| Conduct and reporting of multivariate network meta-analyses: a scoping review |
Mark Loeb
|
Journal of Clinical Epidemiology |
| Capturing diversity: Split systems and circular approximations for conservation |
Caroline Colijn,
Paul Tupper
|
Journal of Theoretical Biology |
| Exploring the dynamics of the 2022 mpox outbreak in Canada |
Michael WZ Li,
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of Medical Virology |
| Population-level effectiveness of pre-exposure prophylaxis for HIV prevention among men who have sex with men in Montréal (Canada): a modelling study of surveillance and survey data |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of the International AIDS Society |
| Associations between human milk oligosaccharides and infant growth in a Bangladeshi mother–infant cohort |
Diego Bassani
|
Pediatric Research |
| Schrödinger's yeast: the challenge of using transformation to compare fitness among Saccharomyces cerevisiae that differ in ploidy or zygosity |
Sarah Otto
|
PeerJ |
| Single-Cell Sequencing of Lung Macrophages and Monocytes Reveals Novel Therapeutic Targets in COPD |
Xuekui Zhang
|
Cells |
| Logical Inconsistencies in the Health Years in Total and Equal Value of Life-Years Gained |
Christopher McCabe
|
Value in Health |
| A method to estimate the serial interval distribution under partially-sampled data |
Caroline Colijn,
Paul Tupper
|
Epidemics |
| Data extraction and comparison for complex systematic reviews: a step-by-step guideline and an implementation example using open-source software |
Javier Sanchez
|
Systematic Reviews |
| Food insecurity in Yukon communities during COVID-19: A qualitative study |
Sara McPhee-Knowles
|
Journal of Agriculture, Food Systems, and Community Development |
| Adjusted estimate of the prevalence of hepatitis delta virus in 25 countries and territories |
Naveed Janjua
|
Journal of Hepatology |
| Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty |
Dean Karlen
|
Nature Communications |
| Nurse practitioner and physician end-of-life home visits and end-of-life outcomes |
Doug Manuel
|
BMJ Supportive and Palliative Care |
| Predicting the Temperature-Driven Development of Stage-Structured Insect Populations with a Bayesian Hierarchical Model |
Benjamin Bolker
|
Journal of Agricultural, Biological, and Environmental Statistics |
| A promising biomarker adaptive Phase 2/3 design – Explained and expanded |
Xuekui Zhang
|
Contemporary Clinical Trials Communications |
| Prevalence and patterns of multimorbidity among linguistic groups of patients receiving home care in Ontario: a retrospective cohort study |
Doug Manuel
|
BMC Geriatrics |
| Association of naturally acquired type-specific HPV antibodies and subsequent HPV re-detection: systematic review and meta-analysis |
Marc Brisson,
Mathieu Maheu-Giroux
|
Infectious Agents and Cancer |
| Effective population size in simple infectious disease models |
Caroline Colijn
|
Journal of Mathematical Biology |
| Density-Dependent Selection during Range Expansion Affects Expansion Load in Life History Traits |
Sarah Otto
|
American Naturalist |
| Phylogenetic identification of influenza virus candidates for seasonal vaccines |
Caroline Colijn
|
Science advances |
| Qualitative Interviews to Add Patient Perspectives in Colorectal Cancer Screening: Improvements in a Learning Health System |
Nathaniel Osgood
|
Journal of Cancer Education |
| Phylogenetic identification of influenza virus candidates for seasonal vaccines |
Caroline Colijn
|
Science Advances |
| Protocol for a longitudinal cohort study of Lyme disease with physical, mental and immunological assessment |
Mark Loeb
|
BMJ open |
| COVID-19 vaccine effectiveness by HIV status and history of injection drug use: a test-negative analysis |
Naveed Janjua
|
Journal of the International AIDS Society |
| A Branch-and-Price Algorithm Enhanced by Decision Diagrams for the Kidney Exchange Problem |
Dionne Aleman
|
Manufacturing and Service Operations Management |
| Health data governance for research use in Alberta |
Tyler Williamson
|
International Journal of Population Data Science |
| Modelling the impacts of male alternative reproductive tactics on population dynamics |
David Earn
|
Journal of the Royal Society, Interface |
| A cross-sectional survey exploring HIV and HCV prevalence among men who purchase sex in Dnipro, Ukraine |
Sharmistha Mishra
|
BMC Public Health |
| Correction: Development and validation of a case definition for problematic menopause in primary care electronic medical records (BMC Medical Informatics and Decision Making, (2023), 23, 1, (202), 10.1186/s12911-023-02298-x) |
Tyler Williamson
|
BMC Medical Informatics and Decision Making |
| Frequency of isolation and phenotypic antimicrobial resistance of fecal Salmonella enterica recovered from dairy cattle in Canada |
Javier Sanchez
|
Journal of Dairy Science |
| Community Insights in Phylogenetic HIV Research: The CIPHR Project Protocol |
Sharmistha Mishra
|
Global Public Health |
| Correction: Can HIV self-testing reach first-time testers? A telephone survey among self-test end users in Côte d’Ivoire, Mali, and Senegal (BMC Infectious Diseases, (2023), 22, S1, (972), 10.1186/s12879-023-08626-w) |
Mathieu Maheu-Giroux
|
BMC Infectious Diseases |
| Development and Evaluation of the Dietary Pattern Calculator (DiPaC) for Personalized Assessment and Feedback |
Doug Manuel
|
Canadian Journal of Dietetic Practice and Research |
| Machine Learning for the Prediction of Survival Post-Allogeneic Hematopoietic Cell Transplantation: A Single-Center Experience |
Dionne Aleman
|
Acta Haematologica |
| From bench to bedside, 2-in-1 design expedites phase 2/3 oncology drug development |
Xuekui Zhang
|
Frontiers in Oncology |
| plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph |
Cedric Chauve
|
Frontiers in Microbiology |
| Development and validation of a case definition for problematic menopause in primary care electronic medical records |
Tyler Williamson
|
BMC Medical Informatics and Decision Making |
| Coupling Mountain Pine Beetle and Forest Population Dynamics Predicts Transient Outbreaks that are Likely to Increase in Number with Climate Change |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Potential population-level effectiveness of one-dose HPV vaccination in low-income and middle-income countries: a mathematical modelling analysis |
Marc Brisson
|
The Lancet Public Health |
| Ethically cleared to launch? |
Timothy Caulfield
|
Science |
| Generic Health Utility Measures in Exercise Oncology: A Scoping Review and Future Directions |
Jeff Round
|
Current Oncology |
| We need to talk about values: A proposed framework for the articulation of normative reasoning in health technology assessment |
Christopher McCabe
|
Health Economics, Policy and Law |
| Can HIV self-testing reach first-time testers? A telephone survey among self-test end users in Côte d’Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
BMC Infectious Diseases |
| Emergence of SARS-CoV-2 Delta Variant and Effect of Nonpharmaceutical Interventions, British Columbia, Canada |
Natalie Prystajecky
|
Emerging infectious diseases |
| Catch-22s of reservoir computing |
Sean Cornelius
|
Physical Review Research |
| ADSP: An adaptive sample pooling strategy for diagnostic testing |
Xuekui Zhang
|
Journal of Biomedical Informatics |
| Demographic and psychometric predictors associated with engagement in risk-associated alternative healthcare behaviours |
Timothy Caulfield
|
PloS one |
| Modelling the transmission of dengue, zika and chikungunya: a scoping review protocol |
Julien Arino
|
BMJ open |
| Protocol for a living evidence synthesis on variants of concern and COVID-19 vaccine effectiveness |
Caroline Colijn,
David Earn
|
Vaccine |
| Adverse childhood experiences: a meta-analysis of prevalence and moderators among half a million adults in 206 studies |
Tyler Williamson
|
World Psychiatry |
| Health care cost of severe obesity and obesity-related comorbidities: A retrospective cohort study from Alberta, Canada |
Tyler Williamson
|
Obesity Research and Clinical Practice |
| Adoption and decision factors regarding selective treatment of clinical mastitis on Canadian dairy farms |
Javier Sanchez
|
Journal of Dairy Science |
| Vaccine Effectiveness of non-adjuvanted and adjuvanted trivalent inactivated influenza vaccines in the prevention of influenza-related hospitalization in older adults: A pooled analysis from the Serious Outcomes Surveillance (SOS) Network of the Canadian Immunization Research Network (CIRN) |
Mark Loeb
|
Vaccine |
| COVID-19 Vaccine's Speed to Market and Vaccine Hesitancy: A Cross-Sectional Survey Study |
Tyler Williamson
|
Healthcare policy = Politiques de sante |
| Cannabis-Involved Traffic Injury Emergency Department Visits After Cannabis Legalization and Commercialization |
Doug Manuel
|
JAMA network open |
| Characteristics of male perpetrators of intimate partner violence and implications for women's HIV status: A pooled analysis of cohabiting couples from 27 countries in Africa (2000-2020) |
Mathieu Maheu-Giroux
|
PLOS Global Public Health |
| Background rates of adverse events of special interest for COVID-19 vaccines: A multinational Global Vaccine Data Network (GVDN) analysis |
Naveed Janjua
|
Vaccine |
| Development of machine learning models for the detection of surgical site infections following total hip and knee arthroplasty: a multicenter cohort study |
Tyler Williamson
|
Antimicrobial Resistance and Infection Control |
| Medium-term scenarios of COVID-19 as a function of immune uncertainties and chronic disease |
Caroline Wagner
|
Journal of the Royal Society, Interface |
| Global impact and cost-effectiveness of one-dose versus two-dose human papillomavirus vaccination schedules: a comparative modelling analysis |
Marc Brisson
|
BMC Medicine |
| Is scientific evidence enough? Using expert opinion to fill gaps in data in antimicrobial resistance research |
Amy Greer
|
PLoS ONE |
| Foodborne Botulism, Canada, 2006–2021<sup>1</sup> |
Natalie Prystajecky
|
Emerging Infectious Diseases |
| Comparison of socio-economic determinants of COVID-19 testing and positivity in Canada: A multi-provincial analysis |
Sharmistha Mishra
|
PLoS ONE |
| Trajectory of health care resources among adults stopping or reducing treatment frequency of botulinum toxin for chronic migraine treatment in Alberta, Canada |
Tyler Williamson
|
Headache |
| Time-to-event outcomes and survival analysis |
Tyler Williamson
|
Translational Sports Medicine |
| Assessing awareness and use of HIV self-testing kits after the introduction of a community-based HIV self-testing programme among men who have sex with men in Kenya |
Sharmistha Mishra
|
PLOS Global Public Health |
| Genomic, clinical and immunity data join forces for public health |
Caroline Colijn
|
Nature Reviews Microbiology |
| The evolution of SARS-CoV-2 seroprevalence in Canada: a time-series study, 2020-2023 |
David Buckeridge
|
CMAJ. Canadian Medical Association Journal |
| A posteriori error analysis for a space-time parallel discretization of parabolic partial differential equations |
Donald Estep
|
Numerical Methods for Partial Differential Equations |
| Coronavirus Disease 2019 Vaccination Is Associated With Reduced Outpatient Antibiotic Prescribing in Older Adults With Confirmed Severe Acute Respiratory Syndrome Coronavirus 2: A Population-Wide Cohort Study |
Doug Manuel,
Sharmistha Mishra
|
Clinical Infectious Diseases |
| Physician continuity of care in the last year of life in community-dwelling adults: retrospective population-based study |
Doug Manuel
|
BMJ Supportive and Palliative Care |
| A stochastic analysis of the interplay between antibiotic dose, mode of action, and bacterial competition in the evolution of antibiotic resistance |
Troy Day
|
PLoS Computational Biology |
| Strengthening health care in Canada post-COVID-19 pandemic |
Christopher McCabe
|
Facets |
| “I don't need any more unknowns hanging over my head”: Views of patients with cancer on variants of uncertain significance and low/moderate risk results from genomic sequencing |
Timothy Caulfield
|
Genetics in Medicine |
| Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19 |
Caroline Colijn,
Paul Tupper
|
Nature communications |
| A proportional incidence rate model for aggregated data to study the vaccine effectiveness against COVID-19 hospital and ICU admissions |
Ashleigh Tuite
|
Biometrics |
| Equity issues rarely addressed in the development of COVID-19 formal recommendations and good practice statements: a cross-sectional study |
Mark Loeb
|
Journal of Clinical Epidemiology |
| The impact of expanded access to direct acting antivirals for Hepatitis C virus on patient outcomes in Canada |
Naveed Janjua
|
PloS one |
| Compositional Modeling with Stock and Flow Diagrams |
Nathaniel Osgood
|
Electronic Proceedings in Theoretical Computer Science, EPTCS |
| Campus node-based wastewater surveillance enables COVID-19 case localization and confirms lower SARS-CoV-2 burden relative to the surrounding community |
Tyler Williamson
|
Water Research |
| Testing Whether Higher Contact Among the Vaccinated Can Be a Mechanism for Observed Negative Vaccine Effectiveness |
Sharmistha Mishra
|
American journal of epidemiology |
| Mortality rates among patients successfully treated for hepatitis C in the era of interferon-free antivirals: population based cohort study |
Naveed Janjua
|
BMJ (Clinical research ed.) |
| End-of-life interventions in patients with cancer |
Doug Manuel
|
BMJ Supportive and Palliative Care |
| A systematic review of the accessibility, acceptability, safety, efficiency, clinical effectiveness, and cost-effectiveness of private cataract and orthopedic surgery clinics |
Jeff Round
|
International journal of technology assessment in health care |
| Evaluating the Impact of Increased Dispensing of Opioid Agonist Therapy Take-Home Doses on Treatment Retention and Opioid-Related Harm among Opioid Agonist Therapy Recipients: A Simulation Study |
Nathaniel Osgood
|
Systems |
| The Complexity of Transferring Remote Monitoring and Virtual Care Technology Between Countries: Lessons From an International Workshop |
Dionne Aleman
|
Journal of Medical Internet Research |
| The utility of SARS-CoV-2 genomic data for informative clustering under different epidemiological scenarios and sampling |
Caroline Colijn,
Natalie Prystajecky
|
Infection, Genetics and Evolution |
| Bumble bee pollination and the wildflower/crop trade-off: When do wildflower enhancements improve crop yield? |
Rebecca Tyson
|
Ecological Modelling |
| Global prevalence, cascade of care, and prophylaxis coverage of hepatitis B in 2022: a modelling study |
Naveed Janjua
|
The Lancet Gastroenterology and Hepatology |
| The impact of respiratory infections and probiotic use on the nasal microbiota of frail residents in long-term care homes |
Mark Loeb
|
ERJ Open Research |
| Public reimbursement policies in Canada for direct-acting antiviral treatment of hepatitis C virus infection: A descriptive study |
Naveed Janjua
|
Canadian Liver Journal |
| Antimicrobial and teat sealant use and selection criteria at dry-off on Canadian dairy farms |
Javier Sanchez
|
Journal of Dairy Science |
| How Canada's decentralised covid-19 response affected public health data and decision making |
Sharmistha Mishra
|
BMJ (Clinical research ed.) |
| Use and misuse of research: Canada's response to covid-19 and its health inequalities |
Sharmistha Mishra
|
BMJ |
| Changes in context, typology and programme outcomes between early and recent periods of sex work among young female sex workers in Mombasa, Kenya: A cross-sectional study |
Sharmistha Mishra
|
PloS one |
| Adolescent childbirth and mobility disability among women ages 15-49: An analysis of population health surveys from 14 low-income and middle-income countries |
Diego Bassani
|
BMJ Open |
| Participatory Modeling with Discrete-Event Simulation: A Hybrid Approach to Inform Policy Development to Reduce Emergency Department Wait Times |
Nathaniel Osgood
|
Systems |
| Medical Masks Versus N95 Respirators for Preventing COVID-19 Among Health Care Workers |
David Fisman
|
Annals of internal medicine |
| Medical Masks Versus N95 Respirators for Preventing COVID-19 Among Health Care Workers |
Mark Loeb
|
Annals of internal medicine |
| Effectiveness of previous infection-induced and vaccine-induced protection against hospitalisation due to omicron BA subvariants in older adults: a test-negative, case-control study in Quebec, Canada |
Marc Brisson
|
The Lancet Healthy Longevity |
| A novel systematic pipeline for increased predictability and explainability of growth patterns in children using trajectory features |
Diego Bassani
|
International Journal of Medical Informatics |
| Population-level impact of expanding PrEP coverage by offering long-acting injectable PrEP to MSM in three high-resource settings: a model comparison analysis |
Mathieu Maheu-Giroux
|
Journal of the International AIDS Society |
| Selection for immune evasion in SARS-CoV-2 revealed by high-resolution epitope mapping and sequence analysis |
Jesse Shapiro
|
iScience |
| Trends in HIV testing, the treatment cascade, and HIV incidence among men who have sex with men in Africa: a systematic review and meta-analysis |
Mathieu Maheu-Giroux
|
The Lancet HIV |
| Unemployment and underemployment are causes of suicide |
Nathaniel Osgood
|
Science advances |
| Leveraging Influenza Virus Surveillance from 2012 to 2015 to Characterize the Burden of Respiratory Syncytial Virus Disease in Canadian Adults ≥50 Years of Age Hospitalized with Acute Respiratory Illness |
Mark Loeb
|
Open Forum Infectious Diseases |
| The role of mucosal barriers in disease progression and transmission |
Caroline Wagner
|
Advanced Drug Delivery Reviews |
| Conceptual and empirical bridges between micro- and macroevolution |
Sarah Otto
|
Nature Ecology and Evolution |
| Examining the effect of the COVID-19 pandemic on community virus prevalence and healthcare utilisation reveals that peaks in asthma, COPD and respiratory tract infection occur with the re-emergence of rhino/enterovirus |
Mark Loeb
|
Thorax |
| Risk of COVID-19 hospitalization in people living with HIV and HIV-negative individuals and the role of COVID-19 vaccination: A retrospective cohort study |
Naveed Janjua
|
International Journal of Infectious Diseases |
| The Association Between Heterosexual anal Intercourse and HIV Acquisition in Three Prospective Cohorts of Women |
Mathieu Maheu-Giroux
|
AIDS and Behavior |
| PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning |
Cedric Chauve
|
Bioinformatics (Oxford, England) |
| Quantifying antimicrobial use on Canadian dairy farms using garbage can audits |
Javier Sanchez
|
Frontiers in Veterinary Science |
| Comparison of pretrained transformer-based models for influenza and COVID-19 detection using social media text data in Saskatchewan, Canada |
Nathaniel Osgood
|
Frontiers in Digital Health |
| A comparison of sampling and testing approaches for the surveillance of SARS-CoV-2 in farmed American mink |
Natalie Prystajecky
|
Journal of Veterinary Diagnostic Investigation |
| Wastewater-based surveillance can be used to model COVID-19-associated workforce absenteeism |
Tyler Williamson
|
Science of the Total Environment |
| Regulating cancer risk prediction: legal considerations and stakeholder perspectives on the Canadian context |
Michael Wolfson
|
Human Genetics |
| Identifying Unique Subgroups of High-Cost Patients With Schizophrenia: A Population-Based Study Using Latent Class Analysis |
Tyler Williamson
|
Health Services Insights |
| Temporality-induced chaos in the Kuramoto Model |
Sean Cornelius
|
Northeast Journal of Complex Systems |
| Species distribution model identifies influence of climatic constraints on severe defoliation at the leading edge of a native insect outbreak |
Amy Hurford
|
Forest Ecology and Management |
| Opioid-related harms and care impacts of conventional and AI-based prescription management strategies: insights from leveraging agent-based modeling and machine learning |
Nathaniel Osgood
|
Frontiers in Digital Health |
| COVID-19: révisionnisme associé au confinement |
Timothy Caulfield
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| COVID-19: révisionnisme associé au confinement |
Timothy Caulfield
|
CMAJ. Canadian Medical Association Journal |
| Rapid diagnostic testing for syphilis in Arctic communities (the STAR study): a multisite prospective field diagnostic accuracy study in an intended-use setting |
Mathieu Maheu-Giroux
|
Clinical Microbiology and Infection |
| Adaptability of single-nucleotide polymorphism-polymerase chain reaction (SNP-PCR) for subtyping SARS-CoV-2 and a new SNP-PCR for XBB, XBB.1.5, and B.Q.1/B.Q.1.1 |
Natalie Prystajecky
|
Clinical Microbiology and Infection |
| Real-World Evidence in Cost-Effectiveness Analysis of Enhanced Influenza Vaccines in Adults ≥ 65 Years of Age: Literature Review and Expert Opinion |
David Fisman
|
Vaccines |
| SARS-CoV-2 cross-sectional seroprevalence study among public school staff in Metro Vancouver after the first Omicron wave in British Columbia, Canada |
Daniel Coombs
|
BMJ Open |
| Plan Assessment Metrics for Dose Painting in Stereotactic Radiosurgery |
Dionne Aleman
|
Advances in Radiation Oncology |
| The influence of sociodemographic factors on COVID-19 vaccine certificate acceptance: A cross-sectional study |
Timothy Caulfield
|
Human Vaccines and Immunotherapeutics |
| Diminished Neutralization Capacity of SARS-CoV-2 Omicron BA.1 in Donor Plasma Collected from January to March 2021 |
Ashleigh Tuite
|
Microbiology spectrum |
| An exploration of the relationship between wastewater viral signals and COVID-19 hospitalizations in Ottawa, Canada |
Doug Manuel
|
Infectious Disease Modelling |
| Analgesic Use Among Adults with a Trauma-Related Emergency Department Visit: A Retrospective Cohort Study from Alberta, Canada |
Tyler Williamson
|
Pain and Therapy |
| Use of latent class analysis and patient reported outcome measures to identify distinct long COVID phenotypes: A longitudinal cohort study |
Naveed Janjua
|
PLoS ONE |
| The impact of alternate level of care on access block and operational strategies to reduce emergency wait times: a multi-center simulation study |
Nathaniel Osgood
|
Canadian Journal of Emergency Medicine |
| Respiratory protection: what SARS-CoV-2 has taught us |
Mark Loeb
|
Current Opinion in Infectious Diseases |
| Advertising Alternative Cancer Treatments and Approaches on Meta Social Media Platforms: Content Analysis |
Timothy Caulfield
|
JMIR Infodemiology |
| A null model for the distribution of fitness effects of mutations |
Troy Day
|
Proceedings of the National Academy of Sciences of the United States of America |
| Life history optimisation drives latitudinal gradients and responses to global change in marine fishes |
Troy Day
|
PLoS Biology |
| Intramammary and systemic use of antimicrobials and their association with resistance in generic Escherichia coli recovered from fecal samples from Canadian dairy herds: A cross-sectional study |
Javier Sanchez
|
Preventive Veterinary Medicine |
| When the role of uncertainty is…uncertain |
David Fisman
|
Proceedings of the National Academy of Sciences of the United States of America |
| “I take it and give it to my partners who will give it to their partners”: Secondary distribution of HIV self-tests by key populations in Côte d’Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
BMC Infectious Diseases |
| Predicting the daily counts of COVID-19 infection using temporal convolutional networks |
Xuekui Zhang
|
Journal of Global Health |
| Inferring the differences in incubation-period and generation-interval distributions of the Delta and Omicron variants of SARS-CoV-2 |
Jonathan Dushoff
|
Proceedings of the National Academy of Sciences of the United States of America |
| A queuing model for ventilator capacity management during the COVID-19 pandemic |
Alexander Rutherford
|
Health Care Management Science |
| A fast and scalable method for inferring phylogenetic networks from trees by aligning lineage taxon strings |
Caroline Colijn
|
Genome research |
| Correction to: Prevalence of depression, syndemic factors and their impact on viral suppression among female sex workers living with HIV in eThekwini, South Africa (BMC Women's Health, (2023), 23, 1, (232), 10.1186/s12905-023-02392-2) |
Sharmistha Mishra
|
BMC Women's Health |
| Urban design and cardio-metabolic risk factors |
Tyler Williamson
|
Preventive Medicine |
| The association between paramedic service system hospital offload time and response time |
Tyler Williamson
|
Canadian Journal of Emergency Medicine |
| Braiding Indigenous rights and endangered species law |
Sarah Otto
|
Science (New York, N.Y.) |
| Braiding Indigenous rights and endangered species law |
Sarah Otto
|
Science |
| Wastewater monitoring can anchor global disease surveillance systems |
Doug Manuel
|
The Lancet Global Health |
| Estimating the Under-ascertainment of COVID-19 cases in Toronto, Ontario, March to May 2020 |
Amy Greer
|
Journal of Public Health Research |
| Understanding the impact of mobility on COVID-19 spread: A hybrid gravity-metapopulation model of COVID-19 |
Naveed Janjua
|
PLoS Computational Biology |
| Beyond Translation: An Overview of Best Practices for Evidence-Informed Decision Making for Public Health Practice |
Julien Arino
|
Studies in Big Data |
| Using “big data” for economic evaluations in genomics |
Christopher McCabe
|
Economic Evaluation in Genomic and Precision Medicine |
| The Contribution of Gestational Diabetes to Diabetes Risk Among First Nations and Non–First Nations Women in Saskatchewan: Results From the DIP: ORRIIGENSS Project |
Nathaniel Osgood
|
Canadian Journal of Diabetes |
| Prevalence of depression, syndemic factors and their impact on viral suppression among female sex workers living with HIV in eThekwini, South Africa |
Sharmistha Mishra
|
BMC Women's Health |
| Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes |
Sandrine Moreira
|
BMC Biology |
| Boosting propagule transport models with individual-specific data from mobile apps |
Mark Lewis
|
Journal of Applied Ecology |
| The impact of threshold decision mechanisms of collective behavior on disease spread |
Troy Day
|
Proceedings of the National Academy of Sciences of the United States of America |
| Next-generation matrices for marine metapopulations: The case of sea lice on salmon farms |
Mark Lewis
|
Ecology and Evolution |
| The impact of unexpected intensive care unit admission after cancer surgery on long-term symptom burden among older adults: a population-based longitudinal analysis |
Doug Manuel
|
Critical Care |
| Antimicrobial use and its association with the isolation of and antimicrobial resistance in Campylobacter spp. recovered from fecal samples from Canadian dairy herds: A cross-sectional study |
Javier Sanchez
|
Preventive Veterinary Medicine |
| The Brief Case: an Infectious Hazard of Hunting |
Natalie Prystajecky
|
Journal of clinical microbiology |
| Intermediate levels of asymptomatic transmission can lead to the highest epidemic fatalities |
Jonathan Dushoff
|
PNAS Nexus |
| Association of COVID-19 Infection With Incident Diabetes |
Naveed Janjua
|
JAMA network open |
| A population-based study of reported hepatitis C diagnoses from 1998 to 2018 in immigrants and nonimmigrants in Quebec, Canada |
Naveed Janjua
|
Journal of Viral Hepatitis |
| COVID-19 lockdown revisionism |
Timothy Caulfield
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Complementary and alternative metrics for tracking population-level trends in child linear growth |
Diego Bassani
|
PLOS Global Public Health |
| Hepatitis B and C in individuals with a history of antipsychotic medication use: A population-based evaluation |
David Fisman
|
PLoS ONE |
| Diversities and the Generalized Circumradius |
Paul Tupper
|
Discrete and Computational Geometry |
| Single nucleotide variants in Pseudomonas aeruginosa populations from sputum correlate with baseline lung function and predict disease progression in individuals with cystic fibrosis |
Jesse Shapiro
|
Microbial genomics |
| People With Human Immunodeficiency Virus Receiving Suppressive Antiretroviral Therapy Show Typical Antibody Durability After Dual Coronavirus Disease 2019 Vaccination and Strong Third Dose Responses |
Natalie Prystajecky
|
Journal of Infectious Diseases |
| Public health interventions, priority populations, and the impact of COVID-19 disruptions on hepatitis C elimination among people who have injected drugs in Montreal (Canada): A modeling study |
Mathieu Maheu-Giroux
|
International Journal of Drug Policy |
| Hepatitis D double reflex testing of all hepatitis B carriers in low-HBV- and high-HBV/HDV-prevalence countries |
Naveed Janjua
|
Journal of Hepatology |
| Stochastic resonance in climate reddening increases the risk of cyclic ecosystem extinction via phase-tipping |
Rebecca Tyson
|
Global Change Biology |
| Extended biasplot command to assess bias, precision, and agreement in method comparison studies |
Tyler Williamson
|
Stata Journal |
| Zooanthroponotic transmission of SARS-CoV-2 and host-specific viral mutations revealed by genome-wide phylogenetic analysis |
Jesse Shapiro
|
eLife |
| COVID-19 Vaccine Effectiveness Against Omicron Infection and Hospitalization |
Naveed Janjua
|
Pediatrics |
| Supplement feed efficiency of growing beef cattle grazing native Campos grasslands during winter: A collated analysis |
Javier Sanchez
|
Translational Animal Science |
| Vaccine effectiveness against hospitalization among adolescent and pediatric SARS-CoV-2 cases between May 2021 and January 2022 in Ontario, Canada: A retrospective cohort study |
David Fisman,
Ashleigh Tuite
|
PLoS ONE |
| Reducing touching eyes, nose and mouth (‘T-zone’) to reduce the spread of infectious disease: A prospective study of motivational, volitional and non-reflective predictors |
Doug Manuel
|
British Journal of Health Psychology |
| Resource and seasonality drive interspecific variability in simulations from a dynamic energy budget model |
Amy Hurford
|
Conservation Physiology |
| Application of Group Sequential Methods to the 2-in-1 Design and Its Extensions for Interim Monitoring |
Xuekui Zhang
|
Statistics in Biopharmaceutical Research |
| Great expectations: patients’ preferences for clinically significant results from genomic sequencing |
Timothy Caulfield
|
Human Genetics |
| Observed negative vaccine effectiveness could be the canary in the coal mine for biases in observational COVID-19 studies |
Sharmistha Mishra
|
International Journal of Infectious Diseases |
| The maximum entropy principle to predict forager spatial distributions: an alternate perspective for movement ecology |
Rebecca Tyson
|
Theoretical Ecology |
| A population-based assessment of myocarditis after messenger RNA COVID-19 booster vaccination among adult recipients |
Naveed Janjua
|
International Journal of Infectious Diseases |
| The association of gestational age at birth with trajectories of early childhood developmental delay among late preterm and early term born children: A longitudinal analysis of All Our Families pregnancy cohort |
Tyler Williamson
|
Paediatric and Perinatal Epidemiology |
| GloveCare: a pilot study in preparation for a cluster crossover randomized controlled trial of non-sterile glove-based care in preventing late-onset infection in the NICU |
Mark Loeb
|
Pilot and Feasibility Studies |
| Differential Patterns by Area-Level Social Determinants of Health in Coronavirus Disease 2019 (COVID-19)–Related Mortality and Non–COVID-19 Mortality: A Population-Based Study of 11.8 Million People in Ontario, Canada |
Sharmistha Mishra
|
Clinical Infectious Diseases |
| Trajectory of maternal depression and parasomnias |
Diego Bassani
|
Journal of Sleep Research |
| Using a hybrid simulation model to assess the impacts of combined COVID-19 containment measures in a high-speed train station |
Nathaniel Osgood
|
Journal of Simulation |
| scAnnotate: an automated cell-type annotation tool for single-cell RNA-sequencing data |
Xuekui Zhang
|
Bioinformatics Advances |
| COVID-19 Vaccination and Healthcare Demand |
Alan Diener
|
Bulletin of Mathematical Biology |
| Psychology Meets Biology in COVID-19: What We Know and Why It Matters for Public Health |
Amy Greer
|
Policy Insights from the Behavioral and Brain Sciences |
| Development of a ParticipACTION App–Based Intervention for Improving Postsecondary Students’ 24-Hour Movement Guideline Behaviors: Protocol for the Application of Intervention Mapping |
Shelby Sturrock
|
JMIR Research Protocols |
| Incidence of SARS-CoV-2 Infection Among People Experiencing Homelessness in Toronto, Canada |
Sharmistha Mishra
|
JAMA network open |
| Proactive Contact Tracing |
David Buckeridge
|
PLOS Digital Health |
| Cost Analysis of a Transition Care Bundle Compared with Usual Care for COPD Patients Being Discharged from Hospital: Evaluation of a Randomized Controlled Trial |
Jeff Round
|
PharmacoEconomics - Open |
| Impact of Age and Severe Acute Respiratory Syndrome Coronavirus 2 Breakthrough Infection on Humoral Immune Responses after Three Doses of Coronavirus Disease 2019 mRNA Vaccine |
Natalie Prystajecky
|
Open Forum Infectious Diseases |
| Opposing effects of plant traits on diversification |
Sarah Otto
|
iScience |
| Mortality and Life Expectancy Lost in Canada Attributable to Dietary Patterns: Evidence From Canadian National Nutrition Survey Linked to Routinely Collected Health Administrative Databases |
Doug Manuel
|
American journal of epidemiology |
| No life-history cost of tebufenozide resistance in the smaller tea tortrix moth |
Troy Day
|
Pest Management Science |
| Epidemiological cluster identification using multiple data sources: an approach using logistic regression |
Caroline Colijn,
Paul Tupper
|
Microbial Genomics |
| Realizing the value in “non-standard” parts of the qPCR standard curve by integrating fundamentals of quantitative microbiology |
Natalie Prystajecky
|
Frontiers in Microbiology |
| The Cascade of Care for Hepatitis C Treatment in Rwanda: A Retrospective Cohort Study of the 2017–2019 Mass Screening and Treatment Campaign |
Naveed Janjua
|
Viruses |
| Impacts of observation frequency on proximity contact data and modeled transmission dynamics |
Nathaniel Osgood
|
PLoS computational biology |
| Trait-dependent diversification in angiosperms: Patterns, models and data |
Sarah Otto
|
Ecology Letters |
| Comparing direct-to-consumer genetic testing services in English, Japanese, and Chinese websites |
Timothy Caulfield
|
Anthropological Science |
| Mpox in people with advanced HIV infection: a global case series |
Sharmistha Mishra
|
The Lancet |
| Older persons living with dementia and their use of acute care services over 2 years in Alberta |
Tyler Williamson
|
Canadian Family Physician |
| Dynamics of fecal coliform bacteria along Canada's coast |
Xuekui Zhang
|
Marine Pollution Bulletin |
| Effectiveness of Coronavirus Disease 2019 Vaccines Against Hospitalization and Death in Canada: A Multiprovincial, Test-Negative Design Study |
Naveed Janjua
|
Clinical Infectious Diseases |
| Detection of Covid-19 Outbreaks Using Built Environment Testing for SARS-CoV-2 |
Doug Manuel
|
NEJM Evidence |
| A Genome-Wide Association Study of Dementia Using the Electronic Medical Record |
Xuekui Zhang
|
BioMedInformatics |
| Global evidence of gender equity in academic health research: a scoping review |
Christopher McCabe
|
BMJ open |
| Comparison of three dosing intervals for the primary vaccination of the SARS-CoV-2 mRNA Vaccine (BNT162b2) on magnitude, neutralization capacity and durability of the humoral immune response in health care workers: A prospective cohort study |
Mark Loeb
|
PLoS ONE |
| Sex-specific relationships between obesity, physical activity, and gray and white matter volume in cognitively unimpaired older adults |
Jean-Paul Soucy
|
GeroScience |
| Temporary treatment cessation versus continuation of first-line tyrosine kinase inhibitor in patients with advanced clear cell renal cell carcinoma (STAR): an open-label, non-inferiority, randomised, controlled, phase 2/3 trial |
Christopher McCabe
|
The Lancet Oncology |
| The role of fire in terrestrial vertebrate richness patterns |
Benjamin Bolker
|
Ecology Letters |
| Descriptive network analysis and the influence of timescale on centrality and cohesion metrics from a system of between-herd dairy cow movements in Ontario, Canada |
Amy Greer
|
Preventive Veterinary Medicine |
| Evaluation of the effectiveness of maternal immunization against pertussis in Alberta using agent-based modeling: A Canadian immunization research network study |
David Fisman,
Nathaniel Osgood
|
Vaccine |
| An introduction to machine learning for classification and prediction |
Tyler Williamson
|
Family practice |
| Author Reply |
Christopher McCabe
|
Value in Health |
| Community diversity is associated with intra-species genetic diversity and gene loss in the human gut microbiome |
Jesse Shapiro
|
eLife |
| Relative Virulence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Among Vaccinated and Unvaccinated Individuals Hospitalized With SARS-CoV-2 |
David Fisman,
Ashleigh Tuite
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Severity of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection in Pregnancy in Ontario: A Matched Cohort Analysis |
David Fisman,
Ashleigh Tuite
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Clinical Severity of Severe Acute Respiratory Syndrome Coronavirus 2 Omicron Variant Relative to Delta in British Columbia, Canada: A Retrospective Analysis of Whole-Genome Sequenced Cases |
Naveed Janjua,
Sharmistha Mishra,
Natalie Prystajecky
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Timing and probability of arrival for sea lice dispersing between salmon farms |
Mark Lewis
|
Royal Society Open Science |
| Spatial modeling of Mycobacterium tuberculosis transmission with dyadic genetic relatedness data |
Caroline Colijn
|
Biometrics |
| Environmental Surface Contamination with Monkeypox Virus in the Ambulatory Setting in Toronto, Canada |
Sharmistha Mishra
|
Open Forum Infectious Diseases |
| Error estimation for the time to a threshold value in evolutionary partial differential equations |
Donald Estep
|
BIT Numerical Mathematics |
| Effective pandemic policy design through feedback does not need accurate predictions |
Sarah Otto
|
PLOS Global Public Health |
| Comparison of influenza and COVID-19 hospitalisations in British Columbia, Canada: a population-based study |
Naveed Janjua
|
BMJ open respiratory research |
| Comparison of Physicochemical Properties of Native Mucus and Reconstituted Mucin Gels |
Caroline Wagner
|
Biomacromolecules |
| Prevalence and risk factors for human papillomavirus infection among female sex workers in Hanoi and Ho Chi Minh City, Viet Nam: a cross-sectional study |
Marc Brisson
|
Western Pacific surveillance and response journal : WPSAR |
| HIV acquisition prior to entry into formal sex work: inference from next-generation viral sequencing |
Sharmistha Mishra
|
AIDS (London, England) |
| To seal or not to seal following an antimicrobial infusion at dry-off? A systematic review and multivariate meta-analysis of the incidence and prevalence of intramammary infections post-calving in dairy cows |
Javier Sanchez
|
Preventive Veterinary Medicine |
| An Agent-Based Social Impact Theory Model to Study the Impact of In-Person School Closures on Nonmedical Prescription Opioid Use among Youth |
Nathaniel Osgood
|
Systems |
| A novel shape-based approach to identify gestational age-adjusted growth patterns from birth to 11 years of age |
Diego Bassani
|
Scientific Reports |
| A model for the early COVID-19 outbreak in China with case detection and behavioural change |
Julien Arino
|
Biomath |
| Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing |
Cedric Chauve
|
Nucleic acids research |
| Wearable Device Validity in Measuring Steps, Energy Expenditure, and Heart Rate Across Age, Gender, and Body Mass Index: Data Analysis From a Systematic Review |
Shelby Sturrock
|
Journal of Physical Activity and Health |
| Comparison of Preprint Postings of Randomized Clinical Trials on COVID-19 and Corresponding Published Journal Articles: A Systematic Review |
Mark Loeb
|
JAMA Network Open |
| Comparing machine learning approaches to incorporate time-varying covariates in predicting cancer survival time |
Benjamin Bolker,
Jonathan Dushoff
|
Scientific Reports |
| Amyloid-PET of the white matter: Relationship to free water, fiber integrity, and cognition in patients with dementia and small vessel disease |
Jean-Paul Soucy
|
Journal of Cerebral Blood Flow and Metabolism |
| Estimating the test-adjusted incidence of Chlamydia trachomatis infections identified through Public Health Ontario Laboratories in Peel region, Ontario, 2010-2018: a population-based study |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
CMAJ open |
| Generating simple classification rules to predict local surges in COVID-19 hospitalizations |
Ashleigh Tuite
|
Health Care Management Science |
| The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information |
Natalie Prystajecky
|
Microbial genomics |
| Simulation Model of a Multi-Hospital Critical Care Network |
Alexander Rutherford
|
Proceedings - Winter Simulation Conference |
| A Health Survey-Based Prediction Equation for Incident CKD |
Doug Manuel
|
Clinical journal of the American Society of Nephrology : CJASN |
| Protective effectiveness of previous SARS-CoV-2 infection and hybrid immunity against the omicron variant and severe disease: a systematic review and meta-regression |
David Buckeridge
|
The Lancet Infectious Diseases |
| Association between physician continuity of care and patient outcomes in clinical teaching units: a cohort analysis |
Tyler Williamson
|
CMAJ open |
| Novel modelling strategies for high-frequency stock trading data |
Xuekui Zhang
|
Financial Innovation |
| Regional and country-level trends in cervical cancer screening coverage in sub-Saharan Africa: A systematic analysis of population-based surveys (2000-2020) |
Marc Brisson,
Mathieu Maheu-Giroux
|
PLoS medicine |
| The Impact of Mask Mandates on Face Mask Use During the COVID-19 Pandemic: Longitudinal Survey Study |
Naveed Janjua
|
JMIR public health and surveillance |
| Health Literacy and Serious or Persistent Mental Illness: A Mixed Methods Study |
Nathaniel Osgood
|
Health literacy research and practice |
| Hands off the Mink! Using Environmental Sampling for SARS-CoV-2 Surveillance in American Mink |
Natalie Prystajecky
|
International Journal of Environmental Research and Public Health |
| How time-scale differences in asymptomatic and symptomatic transmission shape SARS-CoV-2 outbreak dynamics |
Jonathan Dushoff
|
Epidemics |
| Cross-Canada Variability in Blood Donor SARS-CoV-2 Seroprevalence by Social Determinants of Health |
Naveed Janjua
|
Microbiology Spectrum |
| Variation in Testing for and Incidence of Celiac Autoimmunity in Canada: A Population-Based Study |
Tyler Williamson
|
Gastroenterology |
| When host populations move north, but disease moves south: Counter-intuitive impacts of climate change on disease spread |
Amy Hurford
|
Theoretical Ecology |
| Melanin levels in relation to vitamin D among first-generation immigrants from different ethnic groups and origins: A comparative national Canadian cross-sectional study |
Doug Manuel
|
Frontiers in Medicine |
| Environmental Testing of Surfaces in the Room of a Patient With Mpox |
Sharmistha Mishra
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Efficient computation of contributional diversity metrics from microbiome data with FuncDiv |
Jesse Shapiro
|
Bioinformatics (Oxford, England) |
| Spatio-Temporal Clustering of Multi-Location Time Series to Model Seasonal Influenza Spread |
Dionne Aleman
|
IEEE Journal of Biomedical and Health Informatics |
| Evaluating undercounts in epidemics: Response to Maruotti et al. (2022) |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Journal of Medical Virology |
| Foreword |
Timothy Caulfield
|
Investigating Clinical Psychology: Pseudoscience, Fringe Science, and Controversies |
| Safety Profile of Linezolid in Older Adults With Renal Impairment: A Population-Based Retrospective Cohort Study |
Mark Loeb
|
Open Forum Infectious Diseases |
| Population-Level Trends in Emergency Department Encounters for Sexual Assault Preceding and During the COVID-19 Pandemic Across Ontario, Canada |
Doug Manuel
|
JAMA network open |
| Newspaper Coverage of COVID-19 Vaccination Requirement for Organ Transplant |
Timothy Caulfield
|
JAMA network open |
| Pandemic modelling for regions implementing an elimination strategy |
Julien Arino,
Amy Hurford
|
Journal of Theoretical Biology |
| The availability and distribution of vaping retailers across Ontario neighbourhoods, 2016–2019 |
Shelby Sturrock
|
Canadian Journal of Public Health |
| Construction and validation of the Oxford Neurodevelopment Assessment (OX-NDA) in 1-year-old Brazilian children |
Diego Bassani
|
BMC Pediatrics |
| An Elastic Net Regression Model for Identifying Long COVID Patients Using Health Administrative Data: A Population-Based Study |
Naveed Janjua,
Sharmistha Mishra
|
Open Forum Infectious Diseases |
| Clinical severity of Omicron subvariants BA.1, BA.2, and BA.5 in a population-based cohort study in British Columbia, Canada |
Naveed Janjua,
Sharmistha Mishra,
Natalie Prystajecky
|
Journal of Medical Virology |
| Antibody response durability following three-dose coronavirus disease 2019 vaccination in people with HIV receiving suppressive antiretroviral therapy |
Natalie Prystajecky
|
AIDS |
| [<sup>18</sup>F]TRACK, a PET tracer for imaging of tropomyosin receptor kinases (Trk): efficient radiosynthesis and preliminary evaluation in the TgF344-AD rat model of Alzheimer’s disease. |
Jean-Paul Soucy
|
Alzheimer's and Dementia |
| Tau phosphorylation is more closely associated with amyloid-β plaques than with tau neurofibrillary tangles |
Jean-Paul Soucy
|
Alzheimer's and Dementia |
| Association of Linezolid With Risk of Serotonin Syndrome in Patients Receiving Antidepressants |
Mark Loeb
|
JAMA network open |
| Privacy Considerations in the Canadian Regulation of Commercially-Operated Healthcare Artificial Intelligence |
Timothy Caulfield
|
Canadian Journal of Bioethics |
| Governing partnerships with technology companies as part of the COVID-19 response in Canada: A qualitative case study |
Ashleigh Tuite
|
PLOS Digital Health |
| Potential benefit of extended dose schedules of human papillomavirus vaccination in the context of scarce resources and COVID-19 disruptions in low-income and middle-income countries: a mathematical modelling analysis |
Marc Brisson
|
The Lancet Global Health |
| Human monkeypox: a comparison of the characteristics of the new epidemic to the endemic disease |
Sharmistha Mishra
|
BMC Infectious Diseases |
| Association of Phosphorylated Tau Biomarkers With Amyloid Positron Emission Tomography vs Tau Positron Emission Tomography |
Jean-Paul Soucy
|
JAMA neurology |
| Risk factors for COVID-19 hospitalization after COVID-19 vaccination: a population-based cohort study in Canada |
Naveed Janjua
|
International Journal of Infectious Diseases |
| Rapid weed adaptation and range expansion in response to agriculture over the past two centuries |
Sarah Otto
|
Science |
| Observed versus expected rates of myocarditis after SARS-CoV-2 vaccination: a population-based cohort study |
Naveed Janjua
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| HIV- and sex work-related stigmas and quality of life of female sex workers living with HIV in South Africa: a cross-sectional study |
Sharmistha Mishra
|
BMC Infectious Diseases |
| Maximizing the impact of limited vaccine supply under different early epidemic conditions: a 2-city modelling analysis of monkeypox virus transmission among men who have sex with men |
Sharmistha Mishra
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Evaluation of Real-life Use of Point-of-care Rapid Antigen Testing for SARS-CoV-2 in Schools (EPOCRATES): a cohort study |
David Buckeridge
|
CMAJ open |
| Using spatial and population mobility models to inform outbreak response approaches in the Ebola affected area, Democratic Republic of the Congo, 2018-2020 |
Ashleigh Tuite
|
Spatial and Spatio-temporal Epidemiology |
| Genome-wide association studies reveal distinct genetic correlates and increased heritability of antimicrobial resistance in Vibrio cholerae under anaerobic conditions |
Jesse Shapiro
|
Microbial Genomics |
| High-throughput sequencing defines donor and recipient HLA B-cell epitope frequencies for prospective matching in transplantation |
Timothy Caulfield
|
Communications Biology |
| The effects of intimate partner violence on women's risk of HIV acquisition and engagement in the HIV treatment and care cascade: a pooled analysis of nationally representative surveys in sub-Saharan Africa |
Mathieu Maheu-Giroux
|
The Lancet HIV |
| Prognostic factors for streptococcal toxic shock syndrome: Systematic review and meta-analysis |
Mark Loeb
|
BMJ Open |
| Effectiveness of COVID-19 vaccines in people living with HIV in British Columbia and comparisons with a matched HIV-negative cohort: a test-negative design |
Naveed Janjua
|
International Journal of Infectious Diseases |
| Two-Dose Severe Acute Respiratory Syndrome Coronavirus 2 Vaccine Effectiveness With Mixed Schedules and Extended Dosing Intervals: Test-Negative Design Studies From British Columbia and Quebec, Canada |
Marc Brisson,
Natalie Prystajecky
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Fragmentation of outage clusters during the recovery of power distribution grids |
Sean Cornelius
|
Nature Communications |
| Au Canada, la nouvelle normalité nécessitera un système de détection amélioré des pathogènes respiratoires émergents et réémergents |
Sharmistha Mishra
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Medical Masks Versus N95 Respirators for Preventing COVID-19 Among Health Care Workers A Randomized Trial |
Mark Loeb
|
Annals of Internal Medicine |
| Effect of the incremental protection of previous infection against Omicron infection among individuals with a hybrid of infection- and vaccine-induced immunity: a population-based cohort study in Canada |
Sharmistha Mishra
|
International Journal of Infectious Diseases |
| Modeling vaccination and control strategies for outbreaks of monkeypox at gatherings |
Julien Arino
|
Frontiers in Public Health |
| Applied artificial intelligence in healthcare: Listening to the winds of change in a post-COVID-19 world |
David Buckeridge
|
Experimental Biology and Medicine |
| Investigating effective testing strategies for the control of Johne's disease in western Canadian cow-calf herds using an agent-based simulation model |
Nathaniel Osgood
|
Frontiers in Veterinary Science |
| COVID-19 endgame: From pandemic to endemic? Vaccination, reopening and evolution in low- and high-vaccinated populations |
Caroline Colijn,
Paul Tupper
|
Journal of Theoretical Biology |
| Caring for older men and women: whose caregivers are more distressed? A population-based retrospective cohort study |
Doug Manuel
|
BMC Geriatrics |
| Integrating machine learning and digital microfluidics for screening experimental conditions |
Jean-Paul Soucy
|
Lab on a Chip |
| Performance of machine learning algorithms for surgical site infection case detection and prediction: A systematic review and meta-analysis |
Tyler Williamson
|
Annals of Medicine and Surgery |
| Impact of Hepatitis B Virus Infection, Non-alcoholic Fatty Liver Disease, and Hepatitis C Virus Co-infection on Liver-Related Death among People Tested for Hepatitis B Virus in British Columbia: Results from a Large Longitudinal Population-Based Cohort Study |
Naveed Janjua
|
Viruses |
| Assessing the potential for virtualizable care in the pediatric emergency department |
David Buckeridge
|
Journal of Telemedicine and Telecare |
| Estimating the effect of HIV on cervical cancer elimination in South Africa: Comparative modelling of the impact of vaccination and screening |
Marc Brisson
|
eClinicalMedicine |
| Novel care pathway to optimise antimicrobial prescribing for uncomplicated community-acquired pneumonia: study protocol for a prospective before-after cohort study in the emergency department of a tertiary care Canadian children's hospital |
Mark Loeb
|
BMJ Open |
| Assessment of the quality and content of clinical practice guidelines (CPGs) for vitamin D and for immigrants using the AGREE-II instrument: a protocol for systematic review |
Doug Manuel
|
Systematic Reviews |
| SARS-CoV-2 in Nursing Homes: Analysis of Routine Surveillance Data in Four European Countries |
Julien Arino
|
Aging and Disease |
| Influenza vaccine to reduce adverse vascular events in patients with heart failure: a multinational randomised, double-blind, placebo-controlled trial |
Mark Loeb
|
The Lancet Global Health |
| The phoenix hypothesis of speciation |
Sarah Otto
|
Proceedings of the Royal Society B: Biological Sciences |
| Cytomegalovirus Seropositivity in Older Adults Changes the T Cell Repertoire but Does Not Prevent Antibody or Cellular Responses to SARS-CoV-2 Vaccination |
Mark Loeb
|
Journal of Immunology |
| Corrigendum to “Estimating effective reproduction number using generation time versus serial interval, with application to covid-19 in the Greater Toronto Area, Canada” [Infectious Disease Modelling 5 (2020) 889–896, (S2468042720300634), (10.1016/j.idm.2020.10.009)] |
Sharmistha Mishra
|
Infectious Disease Modelling |
| Distributed medium viscosity yields quasi-exponential step-size probability distributions in heterogeneous media |
Caroline Wagner
|
Soft Matter |
| Genome-Wide Association with Uncertainty in the Genetic Similarity Matrix |
Caroline Colijn
|
Journal of computational biology : a journal of computational molecular cell biology |
| Global SARS-CoV-2 seroprevalence from January 2020 to April 2022: A systematic review and meta-analysis of standardized population-based studies |
David Buckeridge
|
PLoS medicine |
| Importance of occupation for SARS-CoV-2 seroprevalence and COVID-19 vaccination among correctional workers in Quebec, Canada: A cross-sectional study |
Mathieu Maheu-Giroux
|
Frontiers in Public Health |
| Continuity of physician care over the last year of life for different cause-of-death categories: a retrospective population-based study |
Doug Manuel
|
CMAJ open |
| Targeted genomic sequencing with probe capture for discovery and surveillance of coronaviruses in bats |
Natalie Prystajecky
|
eLife |
| Text Message Reminders to Improve Immunization Appointment Attendance in Alberta, Canada: The Childhood Immunization Reminder Project Pilot Study |
Larry Svenson
|
JMIR mHealth and uHealth |
| Improving Medicines use in People with Polypharmacy in Primary Care (IMPPP): Protocol for a multicentre cluster randomised trial comparing a complex intervention for medication optimization against usual care |
Jeff Round
|
NIHR Open Research |
| Comparative Risk of Myocarditis/Pericarditis Following Second Doses of BNT162b2 and mRNA-1273 Coronavirus Vaccines |
Naveed Janjua
|
Journal of the American College of Cardiology |
| Characterizing Longitudinal Antibody Responses in Recovered Individuals Following COVID-19 Infection and Single-Dose Vaccination: A Prospective Cohort Study |
Natalie Prystajecky
|
Viruses |
| Impact of Stagnation on the Diversity of Cyanobacteria in Drinking Water Treatment Plant Sludge |
Jesse Shapiro
|
Toxins |
| Association between influenza vaccination and risk of stroke in Alberta, Canada: a population-based study |
Larry Svenson
|
The Lancet. Public health |
| Timing of elimination of hepatitis C virus in Canada’s provinces |
Naveed Janjua
|
Canadian Liver Journal |
| Using Real-World Data to Determine Health System Costs of Ontario Women Screened for Breast Cancer |
Michael Wolfson
|
Current oncology (Toronto, Ont.) |
| Global Variations in Event-Based Surveillance for Disease Outbreak Detection: Time Series Analysis |
David Buckeridge
|
JMIR public health and surveillance |
| Characteristics of Family Physicians Delivering Home Visits: A Canadian Retrospective Cohort Study |
Doug Manuel
|
Journal of Pain and Symptom Management |
| The WHO AWaRe Antibiotic Book: providing guidance on optimal use and informing policy |
Mark Loeb
|
The Lancet Infectious Diseases |
| Irregular population cycles driven by environmental stochasticity and saddle crawlbys |
David Earn
|
Oikos |
| Describing settings of care in the last 100 days of life for cancer decedents: a population-based descriptive study |
Doug Manuel
|
Cancer Medicine |
| Modeling electronic health record data using an end-to-end knowledge-graph-informed topic model |
David Buckeridge
|
Scientific Reports |
| The best of both worlds: Combining population genetic and quantitative genetic models |
Sarah Otto
|
Theoretical Population Biology |
| Optimal Planning of Health Services through Genetic Algorithm and Discrete Event Simulation: A Proposed Model and Its Application to Stroke Rehabilitation Care |
Jeff Round
|
MDM Policy and Practice |
| COVID-19 cluster size and transmission rates in schools from crowdsourced case reports |
Caroline Colijn,
Paul Tupper
|
eLife |
| Timeliness of reporting of SARS-CoV-2 seroprevalence results and their utility for infectious disease surveillance |
David Buckeridge
|
Epidemics |
| The potential of genomics for infectious disease forecasting |
Caroline Colijn
|
Nature Microbiology |
| Detecting minimum energy states and multi-stability in nonlocal advection–diffusion models for interacting species |
Mark Lewis
|
Journal of Mathematical Biology |
| Rituximab Toxicity after Preemptive or Therapeutic Administration for Post-Transplant Lymphoproliferative Disorder |
Tyler Williamson
|
Transplantation and Cellular Therapy |
| Discordance and Concordance between Cerebrospinal and [<sup>18</sup>F]FDG-PET Biomarkers in Assessing Atypical and Early-Onset AD Dementia Cases |
Jean-Paul Soucy
|
Neurology |
| Using Data from a Short Video Social Media Platform to Identify Emergent Monkeypox Conspiracy Theories |
Timothy Caulfield
|
JAMA Network Open |
| Cov2clusters: genomic clustering of SARS-CoV-2 sequences |
Caroline Colijn,
Natalie Prystajecky
|
BMC Genomics |
| Coronavirus disease 2019 vaccine effectiveness among a population-based cohort of people living with HIV |
Naveed Janjua
|
AIDS |
| Estimated Protection of Prior SARS-CoV-2 Infection Against Reinfection with the Omicron Variant among Messenger RNA-Vaccinated and Nonvaccinated Individuals in Quebec, Canada |
Marc Brisson
|
JAMA Network Open |
| Synthetic data as an enabler for machine learning applications in medicine |
David Buckeridge
|
iScience |
| Analyzing Phylogenetic Trees with a Tree Lattice Coordinate System and a Graph Polynomial |
Caroline Colijn
|
Systematic biology |
| Chronic hepatitis C infection is associated with higher incidence of extrahepatic cancers in a Canadian population based cohort |
Naveed Janjua
|
Frontiers in Oncology |
| Donation and transplantation coverage in the Canadian media: a content analysis of story focus over 2 decades |
Timothy Caulfield
|
Canadian journal of surgery. Journal canadien de chirurgie |
| How Generalizable Are Randomized Controlled Trials (RCTs) in Staphylococcus aureus Bacteremia? A Description of the Mortality Gap Between RCTs and Observational Studies |
Mark Loeb
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Shotgun Metagenomic Sequencing to Assess Cyanobacterial Community Composition following Coagulation of Cyanobacterial Blooms |
Jesse Shapiro
|
Toxins |
| Colchicine and aspirin in community patients with COVID-19 (ACT): an open-label, factorial, randomised, controlled trial |
Mark Loeb
|
The Lancet Respiratory Medicine |
| Colchicine and the combination of rivaroxaban and aspirin in patients hospitalised with COVID-19 (ACT): an open-label, factorial, randomised, controlled trial |
Mark Loeb
|
The Lancet Respiratory Medicine |
| Factors associated with high health care spending among patients with schizophrenia |
Tyler Williamson
|
Health Promotion and Chronic Disease Prevention in Canada |
| Association between close interpersonal contact and vaccine hesitancy: Findings from a population-based survey in Canada |
Naveed Janjua
|
Frontiers in public health |
| COVID-19 Cases Among Congregate Care Facility Staff by Neighborhood of Residence and Social and Structural Determinants: Observational Study |
Sharmistha Mishra
|
JMIR public health and surveillance |
| Human monkeypox: cutaneous lesions in 8 patients in Canada |
Sharmistha Mishra
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| An urgent call to include men who have sex with men in the HPV immunisation programme in Kenya |
Sharmistha Mishra
|
BMJ Global Health |
| The impact of sampling bias on viral phylogeographic reconstruction |
Caroline Colijn
|
PLOS Global Public Health |
| Associations of calf management practices with antimicrobial use in Canadian dairy calves |
Javier Sanchez
|
Journal of Dairy Science |
| Modeling the potential impact of pre-exposure prophylaxis for HIV among men who have sex with men in Cameroon |
Sharmistha Mishra
|
BMC infectious diseases |
| Esophageal Monkeypox lesion |
Sharmistha Mishra
|
Clinical Gastroenterology and Hepatology |
| Effect of Movement on the Early Phase of an Epidemic |
Julien Arino
|
Bulletin of Mathematical Biology |
| Pathogen evolution during vaccination campaigns |
Troy Day
|
PLoS biology |
| Deep learning methods may not outperform other machine learning methods on analyzing genomic studies |
Xuekui Zhang
|
Frontiers in Genetics |
| Older Adults Mount Less Durable Humoral Responses to Two Doses of COVID-19 mRNA Vaccine but Strong Initial Responses to a Third Dose |
Natalie Prystajecky
|
The Journal of infectious diseases |
| Protection against omicron (B.1.1.529) BA.2 reinfection conferred by primary omicron BA.1 or pre-omicron SARS-CoV-2 infection among health-care workers with and without mRNA vaccination: a test-negative case-control study |
Marc Brisson
|
The Lancet Infectious Diseases |
| Utilization of the Abbott SARS-CoV-2 IgG II Quant Assay To Identify High-Titer Anti-SARS-CoV-2 Neutralizing Plasma against Wild-Type and Variant SARS-CoV-2 Viruses |
Ashleigh Tuite
|
Microbiology spectrum |
| Pandemic fatigue or enduring precautionary behaviours? Canadians’ long-term response to COVID-19 public health measures |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Preventive Medicine Reports |
| A better normal in Canada will need a better detection system for emerging and re-emerging respiratory pathogens |
Sharmistha Mishra
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Opportunities and considerations for the design of decentralized delivery of antiretroviral therapy for female sex workers living with HIV in South Africa |
Sharmistha Mishra
|
BMC Health Services Research |
| BioCaster in 2021: automatic disease outbreaks detection from global news media |
David Buckeridge
|
Bioinformatics (Oxford, England) |
| Adjuvant-attenuated symptom severity of influenza infections in vaccinated children |
Mark Loeb
|
Infectious Medicine |
| Linkage of the nationally representative Canadian Community Health Survey – Nutrition 2004 to routinely collected mortality records |
Doug Manuel
|
Health Reports |
| The monkeypox virus |
Sharmistha Mishra
|
CMAJ. Canadian Medical Association Journal |
| Assessing transmission risks and control strategy for monkeypox as an emerging zoonosis in a metropolitan area |
Julien Arino
|
Journal of Medical Virology |
| Stopping syphilis transmission in Arctic communities through rapid diagnostic testing: The STAR study protocol |
Mathieu Maheu-Giroux
|
PLoS ONE |
| A Bayesian adaptive design for clinical trials of rare efficacy outcomes with multiple definitions |
Diego Bassani
|
Clinical Trials |
| The complexity of examining laboratorybased biological markers associated with mortality in hospitalized patients during early phase of the COVID-19 pandemic: A systematic review and evidence map |
Mark Loeb
|
PLoS ONE |
| Patient-Reported Symptom Burden After Cancer Surgery in Older Adults: A Population-Level Analysis |
Doug Manuel
|
Annals of Surgical Oncology |
| Estimated costs and quality-adjusted life-years lost due to N. gonorrhoeae infections acquired in 2015 in the United States: A modelling study of overall burden and disparities by age, race/ethnicity, and other factors |
Ashleigh Tuite
|
Lancet Regional Health - Americas |
| Serial infection with SARS-CoV-2 Omicron BA.1 and BA.2 following three-dose COVID-19 vaccination |
Natalie Prystajecky
|
Frontiers in Immunology |
| Deploying wearable sensors for pandemic mitigation: A counterfactual modelling study of Canada’s second COVID-19 wave |
Caroline Wagner
|
PLOS Digital Health |
| Measuring progress towards reaching zero new HIV acquisitions among key populations in Québec (Canada) using routine surveillance data: a mathematical modelling study |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of the International AIDS Society |
| Estimating social contacts in mass gatherings for disease outbreak prevention and management: case of Hajj pilgrimage |
Julien Arino
|
Tropical Diseases, Travel Medicine and Vaccines |
| MixEHR-Guided: A guided multi-modal topic modeling approach for large-scale automatic phenotyping using the electronic health record |
David Buckeridge
|
Journal of Biomedical Informatics |
| Competing health risks associated with the COVID-19 pandemic and early response: A scoping review |
Sharmistha Mishra
|
PLoS ONE |
| Comparative Single-Dose mRNA and ChAdOx1 Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2, Including Variants of Concern: Test-Negative Design, British Columbia, Canada |
Natalie Prystajecky
|
The Journal of infectious diseases |
| Handling Sparse Longitudinal Data with Irregular Missing Data-Analysis of Fecal Coliform Bacteria Data |
Xuekui Zhang
|
2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2022 |
| Ku-gaa-gii pimitizi-win, the COVID-19 cohort study of people experiencing homelessness in Toronto, Canada: a study protocol |
Sharmistha Mishra,
Sharmistha Mishra
|
BMJ Open |
| Single-Dose Messenger RNA Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2 in Healthcare Workers Extending 16 Weeks Postvaccination: A Test-Negative Design From Québec, Canada |
Marc Brisson
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Age-Specific Changes in Virulence Associated With Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants of Concern |
David Fisman,
Ashleigh Tuite
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Seroprevalence and Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Among Incarcerated Adult Men in Quebec, Canada, 2021 |
Mathieu Maheu-Giroux
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| How Can Progress Toward Ending the Human Immunodeficiency Virus Epidemic in the United States Be Monitored? |
Mathieu Maheu-Giroux
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Case Study of Collaborative Modeling in an Indigenous Community |
Nathaniel Osgood
|
Water (Switzerland) |
| Development and validation of a cardiovascular disease risk-prediction model using population health surveys and dietary indices: the Cardiovascular Disease Population Risk Tool - Nutrition (CVDPoRT-Nutrition) |
Doug Manuel
|
International Journal of Population Data Science |
| Cohort profile: the British Columbia COVID-19 Population Mixing Patterns Survey (BC-Mix) |
Naveed Janjua
|
BMJ Open |
| SARS-CoV-2 infection in Africa: A systematic review and meta-analysis of standardised seroprevalence studies, from January 2020 to December 2021 |
David Buckeridge
|
BMJ Global Health |
| Advanced biological age is associated with improved antibody responses in older high-dose influenza vaccine recipients over four consecutive seasons |
Mark Loeb
|
Immunity and Ageing |
| Deep clustering of bacterial tree images |
Caroline Colijn
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| What were the historical reasons for the resistance to recognizing airborne transmission during the COVID-19 pandemic? |
David Fisman
|
Indoor Air |
| The WHO essential medicines list AWaRe book: from a list to a quality improvement system |
Mark Loeb
|
Clinical Microbiology and Infection |
| Tracking Emergence and Spread of SARS-CoV-2 Omicron Variant in Large and Small Communities by Wastewater Monitoring in Alberta, Canada |
Larry Svenson
|
Emerging Infectious Diseases |
| Using simulation modelling and systems science to help contain COVID-19: A systematic review |
Nathaniel Osgood
|
Systems Research and Behavioral Science |
| Incorporating nonlinearity with generalized functional responses to simulate multiple predator effects |
Benjamin Bolker
|
PeerJ |
| ProbeTools: designing hybridization probes for targeted genomic sequencing of diverse and hypervariable viral taxa |
Natalie Prystajecky
|
BMC Genomics |
| Human papillomavirus vaccine effectiveness by number of doses: Updated systematic review of data from national immunization programs |
Marc Brisson
|
Vaccine |
| Automatic Phenotyping by a Seed-guided Topic Model |
David Buckeridge
|
Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining |
| Comprehensive Phylogenomics of Methylobacterium Reveals Four Evolutionary Distinct Groups and Underappreciated Phyllosphere Diversity |
Jesse Shapiro
|
Genome Biology and Evolution |
| Estimating the lagged effect of price discounting: a time-series study on sugar sweetened beverage purchasing in a supermarket |
David Buckeridge
|
BMC Public Health |
| Recent economic evaluation of 1-dose HPV vaccination uses unsupported assumptions |
Marc Brisson
|
Vaccine |
| Trends in all-cause mortality and inpatient and outpatient visits for ambulatory care sensitive conditions during the first year of the COVID-19 pandemic: A population-based study |
Doug Manuel
|
Journal of Hospital Medicine |
| Estimation of SARS-CoV-2 antibody prevalence through serological uncertainty and daily incidence |
Caroline Colijn
|
Canadian Journal of Statistics |
| Structural sensitivity in the functional responses of predator–prey models |
Rebecca Tyson
|
Ecological Complexity |
| Immunogenicity, safety, and efficacy of the HPV vaccines among people living with HIV: A systematic review and meta-analysis |
Marc Brisson,
Mathieu Maheu-Giroux
|
eClinicalMedicine |
| Smoking and e-cigarette use: key variables in testing IgA-oriented intranasal vaccines |
Mark Loeb
|
The Lancet Respiratory Medicine |
| The unmitigated profile of COVID-19 infectiousness |
Jonathan Dushoff
|
eLife |
| The United States COVID-19 Forecast Hub dataset |
Dean Karlen
|
Scientific Data |
| Evaluation of the PREDIGT score’s performance in identifying newly diagnosed Parkinson’s patients without motor examination |
Doug Manuel
|
npj Parkinson's Disease |
| Modestly protective cytomegalovirus vaccination of young children effectively prevents congenital infection at the population level |
Daniel Coombs
|
Vaccine |
| Individualized Prospective Prediction of Opioid Use Disorder |
Larry Svenson
|
Canadian Journal of Psychiatry |
| Population-based sequencing of Mycobacterium tuberculosis reveals how current population dynamics are shaped by past epidemics |
Caroline Colijn
|
eLife |
| Population-based sequencing of Mycobacterium tuberculosis reveals how current population dynamics are shaped by past epidemics |
Caroline Colijn
|
eLife |
| Impact of COVID-19 pandemic on HCV care cascade in Rwanda: Ecological study from July 2019 to June 2021 |
Naveed Janjua
|
Clinical Liver Disease |
| From Policy to Prediction: Forecasting COVID-19 Dynamics Under Imperfect Vaccination |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Adapt or die: How the pandemic made the shift from EBM to EBM+ more urgent |
David Fisman
|
BMJ Evidence-Based Medicine |
| Editorial: Statistical Data Science - Theory and Applications in Analyzing Omics Data |
Xuekui Zhang
|
Frontiers in Applied Mathematics and Statistics |
| Routine programmatic data show a positive population-level impact of HIV self-testing: the case of Côte d'Ivoire and implications for implementation |
Mathieu Maheu-Giroux
|
AIDS |
| Mathematical modelling of vaccination rollout and NPIs lifting on COVID-19 transmission with VOC: a case study in Toronto, Canada |
Julien Arino
|
BMC Public Health |
| Invariance, Encodings, and Generalization: Learning Identity Effects With Neural Networks |
Paul Tupper
|
Neural Computation |
| Longitudinal determinants of anal intercourse among women with, and without HIV in the United States |
Mathieu Maheu-Giroux
|
BMC Women's Health |
| Transmission dynamics of SARS-CoV-2 in British Columbia’s largest school district during the second half of the 2020–2021 school year |
Natalie Prystajecky
|
Canadian Journal of Public Health |
| Revisiting Transfer Functions: Learning About a Lagged Exposure-Outcome Association in Time-Series Data |
David Buckeridge
|
International Journal of Public Health |
| Universal healthcare and the pandemic mortality gap |
David Fisman
|
Proceedings of the National Academy of Sciences of the United States of America |
| Risk heterogeneity in compartmental HIV transmission models of ART as prevention in Sub-Saharan Africa: A scoping review |
Sharmistha Mishra
|
Epidemics |
| Symptomatic and Asymptomatic Transmission of SARS-CoV-2 in K-12 Schools, British Columbia, Canada April to June 2021 |
Daniel Coombs
|
Microbiology Spectrum |
| Parasite-induced shifts in host movement may explain the transient coexistence of high- and low-pathogenic disease strains |
Amy Hurford
|
Journal of Evolutionary Biology |
| Seropositivity and risk factors for SARS-CoV-2 infection in a South Asian community in Ontario: a cross-sectional analysis of a prospective cohort study |
Mark Loeb
|
CMAJ open |
| Local and Global Existence for Nonlocal Multispecies Advection-Diffusion Models |
Mark Lewis
|
SIAM Journal on Applied Dynamical Systems |
| Spike Mutation Profiles Associated With SARS-CoV-2 Breakthrough Infections in Delta Emerging and Predominant Time Periods in British Columbia, Canada |
Caroline Colijn,
Naveed Janjua,
Natalie Prystajecky
|
Frontiers in Public Health |
| The Canadian Statistical Sciences Institute 2003–2022 |
Donald Estep
|
Canadian Journal of Statistics |
| The Collapse of Infectious Disease Diagnoses Commonly Due to Communicable Respiratory Pathogens during the Coronavirus Disease 2019 Pandemic: A Time Series and Hierarchical Clustering Analysis |
Doug Manuel
|
Open Forum Infectious Diseases |
| Exploring the impact of military conflict on sex work in Ukraine: Women’s experiences of economic burden |
Sharmistha Mishra
|
Global Public Health |
| Evaluating the impact of community interventions on childhood obesity in populations living in low-income households in Los Angeles: A simulation study |
Nathaniel Osgood
|
Pediatric Obesity |
| Shorter versus longer durations of antibiotic treatment for patients with community-acquired pneumonia: a protocol for a systematic review and meta-analysis |
Mark Loeb
|
BMJ open |
| Bistability in deterministic and stochastic SLIAR-type models with imperfect and waning vaccine protection |
Julien Arino
|
Journal of Mathematical Biology |
| Growth delay: an alternative measure of population health based on child height distributions |
Diego Bassani
|
Annals of Human Biology |
| Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination |
Dean Karlen
|
eLife |
| The authors respond to criticisms of their model parameters |
David Fisman,
Ashleigh Tuite
|
CMAJ. Canadian Medical Association Journal |
| Staphylococcus aureus bacteremia mortality across country income groups: A secondary analysis of a systematic review |
Mark Loeb
|
International Journal of Infectious Diseases |
| Survival Modelling for Data From Combined Cohorts: Opening the Door to Meta Survival Analyses and Survival Analysis Using Electronic Health Records |
David Buckeridge
|
International Statistical Review |
| Evaluation of the bioMérieux VIDAS HIV Duo Quick and Anti-HCV assays for dried blood spot based serosurveillance |
Sharmistha Mishra
|
Scientific Reports |
| The importance of the generation interval in investigating dynamics and control of new SARS-CoV-2 variants |
Benjamin Bolker,
Jonathan Dushoff
|
Journal of the Royal Society Interface |
| Seasonality of influenza and coseasonality with avian influenza in Bangladesh, 2010–19: a retrospective, time-series analysis |
David Fisman,
Amy Greer
|
The Lancet Global Health |
| Unbalanced selection: The challenge of maintaining a social polymorphism when a supergene is selfish |
Sarah Otto
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| Comparative performance of the EuroQol EQ-5D-5L and the CDC healthy days measures in assessing population health |
Larry Svenson
|
Journal of Patient-Reported Outcomes |
| EpiTopics: A dynamic machine learning model to predict and inform non-pharmacological public health interventions from global news reports |
David Buckeridge
|
STAR Protocols |
| Downsizing of COVID-19 contact tracing in highly immune populations |
Amy Hurford
|
PLoS ONE |
| Income inequality and population health: a political-economic research agenda |
Michael Wolfson
|
Journal of Epidemiology and Community Health |
| Fast and accurate matching of cellular barcodes across short-reads and long-reads of single-cell RNA-seq experiments |
Cedric Chauve
|
iScience |
| 18F-MK-6240 tau-PET in genetic frontotemporal dementia |
Jean-Paul Soucy
|
Brain : a journal of neurology |
| Older Age and Frailty are Associated with Higher Mortality but Lower ICU Admission with COVID-19 |
Mark Loeb
|
Canadian Geriatrics Journal |
| Human Salmonella enteritidis illness outbreak associated with exposure to live mice in British Columbia, Canada, 2018–2019 |
Natalie Prystajecky
|
Zoonoses and Public Health |
| A Qualitative Comparison of the Abbott SARS-CoV-2 IgG II Quant Assay against Commonly Used Canadian SARS-CoV-2 Enzyme Immunoassays in Blood Donor Retention Specimens, April 2020 to March 2021 |
Ashleigh Tuite
|
Microbiology Spectrum |
| Reactivity, Attenuation, and Transients in Metapopulations |
Mark Lewis
|
SIAM Journal on Applied Dynamical Systems |
| A framework to model global, regional, and national estimates of intimate partner violence |
Mathieu Maheu-Giroux
|
BMC Medical Research Methodology |
| Seropositivity to SARS-CoV-2 in Alberta, Canada in a post-vaccination period (March 2021–July 2021) |
Larry Svenson
|
Infectious Diseases |
| Risk of hepatitis C reinfection following successful therapy among people living with HIV: a global systematic review, meta-analysis, and meta-regression |
Naveed Janjua
|
The Lancet HIV |
| Analysis of overdispersion in airborne transmission of COVID-19 |
Sharmistha Mishra
|
Physics of Fluids |
| Markers of systemic inflammation are positively associated with influenza vaccine antibody responses with a possible role for ILT2(+)CD57(+) NK-cells |
Mark Loeb
|
Immunity and Ageing |
| Predictors of all-cause mortality among patients hospitalized with influenza, respiratory syncytial virus, or SARS-CoV-2 |
Rafal Kustra,
Sharmistha Mishra
|
Influenza and other Respiratory Viruses |
| A Conceptual Framework for Representing Events Under Public Health Surveillance |
David Buckeridge
|
Studies in Health Technology and Informatics |
| Time trends in social contacts of individuals according to comorbidity and vaccination status, before and during the COVID-19 pandemic |
Marc Brisson
|
BMC Medicine |
| Time trends in social contacts before and during the COVID-19 pandemic: the CONNECT study |
Marc Brisson
|
BMC Public Health |
| Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Examining the role of person-to-person transmission during a verocytotoxigenic Escherichia coli outbreak in Ontario, Canada |
David Fisman,
Amy Greer
|
BMC Research Notes |
| A SARS-CoV-2 outbreak associated with vaccine breakthrough in an acute care hospital |
Mark Loeb
|
American Journal of Infection Control |
| Identifying risk factors for prevalent anal human papillomavirus type 16 infection in women living with HIV |
Tyler Williamson,
Tyler Williamson
|
PLoS ONE |
| Risk Factors for SARS-CoV-2 Infection and Illness in Cats and Dogs |
Natalie Prystajecky
|
Emerging Infectious Diseases |
| cSurvival: a web resource for biomarker interactions in cancer outcomes and in cell lines |
Xuekui Zhang
|
Briefings in Bioinformatics |
| Building knowledge, optimising physical and mental health and setting up healthier life trajectories in South African women (Bukhali): A preconception randomised control trial part of the Healthy Life Trajectories Initiative (HeLTI) |
Diego Bassani
|
BMJ Open |
| A Mixed Integer Linear Programming Algorithm for Plasmid Binning |
Cedric Chauve
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| Prevalence of bovine Babesia spp., Anaplasma marginale, and their co-infections in Latin America: Systematic review-meta-analysis |
Javier Sanchez
|
Ticks and Tick-borne Diseases |
| Longitudinal SARS-CoV-2 RNA wastewater monitoring across a range of scales correlates with total and regional COVID-19 burden in a well-defined urban population |
Tyler Williamson,
Tyler Williamson
|
Water Research |
| Heal-me PiONEer (personalized online nutrition and exercise): An RCT assessing 2 levels of app-based programming in individuals with chronic disease |
Kate Harback,
Jeff Round
|
Contemporary Clinical Trials |
| Evaluating the Individual Healthcare Costs and Burden of Disease Associated with RSV Across Age Groups |
Larry Svenson
|
PharmacoEconomics |
| Testing and Isolation Efficacy: Insights from a Simple Epidemic Model |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Bulletin of Mathematical Biology |
| Effectiveness of the influenza vaccine at reducing adverse events in patients with heart failure: A systematic review and meta-analysis |
Mark Loeb
|
Vaccine |
| HBV elimination in sub-Saharan Africa: Rwanda's approach to health system integration |
Naveed Janjua
|
The Lancet Gastroenterology and Hepatology |
| Now or later: Health impacts of delaying single-dose HPV vaccine implementation in a high-burden setting |
Marc Brisson
|
International Journal of Cancer |
| Screening Large Population Health Databases for Potential Coronavirus Disease 2019 Therapeutics: A Pharmacopeia-Wide Association Study of Commonly Prescribed Medications |
Doug Manuel
|
Open Forum Infectious Diseases |
| Face masking and COVID-19: potential effects of variolation on transmission dynamics |
David Earn
|
Journal of the Royal Society, Interface |
| Beyond resource selection: emergent spatio–temporal distributions from animal movements and stigmergent interactions |
Mark Lewis
|
Oikos |
| Social Contacts and Transmission of COVID-19 in British Columbia, Canada |
Naveed Janjua
|
Frontiers in Public Health |
| Population immunity to measles in Canada using Canadian Health Measures survey data – A Canadian Immunization Research Network (CIRN) study |
Marc Brisson
|
Vaccine |
| Spreading speed of chronic wasting disease across deer groups with overlapping home ranges |
Mark Lewis
|
Journal of Theoretical Biology |
| Mortality trends and length of stays among hospitalized patients with COVID-19 in Ontario and Québec (Canada): a population-based cohort study of the first three epidemic waves |
Marc Brisson,
David Buckeridge,
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
International Journal of Infectious Diseases |
| Impact of population mixing between vaccinated and unvaccinated subpopulations on infectious disease dynamics: implications for SARS-CoV-2 transmission |
David Fisman,
Ashleigh Tuite
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Vitamin D and Chronic Diseases among First-Generation Immigrants: A Large-Scale Study Using Canadian Health Measures Survey (CHMS) Data |
Doug Manuel
|
Nutrients |
| From science to politics: COVID-19 information fatigue on YouTube |
Jonathan Dushoff,
David Earn
|
BMC Public Health |
| Nonpharmaceutical interventions to prevent viral respiratory infection in community settings: an umbrella review |
Mark Loeb
|
ERJ Open Research |
| Efficacy of a "stay-at-home" policy on SARS-CoV-2 transmission in Toronto, Canada: a mathematical modelling study |
Julien Arino
|
CMAJ open |
| Willingness to use and distribute HIV self-test kits to clients and partners: A qualitative analysis of female sex workers' collective opinion and attitude in Côte d'Ivoire, Mali, and Senegal |
Mathieu Maheu-Giroux
|
Women's health (London, England) |
| A Rapid Literature Review of Multi-Criteria Decision Support Methods in the Context of One Health for All-Hazards Threat Prioritization |
Javier Sanchez
|
Frontiers in Public Health |
| Time-dependent memory and individual variation in Arctic brown bears (Ursus arctos) |
Mark Lewis
|
Movement Ecology |
| An Innovative Model of Pediatric Emergency Department Mental Health Care: Protocol for a Multicenter Type 1 Effectiveness-Implementation Cluster Randomized Trial |
Jeff Round
|
Journal of the American Academy of Child and Adolescent Psychiatry |
| What Is the Optimal Follow-up Length for Mortality in Staphylococcus aureus Bacteremia? Observations From a Systematic Review of Attributable Mortality |
Mark Loeb
|
Open Forum Infectious Diseases |
| Mathematical modeling of COVID-19 in British Columbia: An age-structured model with time-dependent contact rates |
Caroline Colijn,
Daniel Coombs,
Naveed Janjua
|
Epidemics |
| Long-Term Persistence of Spike Protein Antibody and Predictive Modeling of Antibody Dynamics After Infection With Severe Acute Respiratory Syndrome Coronavirus 2 |
Caroline Colijn
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Single-dose mRNA Vaccine Effectiveness Against Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Including Alpha and Gamma Variants: A Test-negative Design in Adults 70 Years and Older in British Columbia, Canada |
Natalie Prystajecky
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| A wastewater-based epidemic model for SARS-CoV-2 with application to three Canadian cities |
Michael WZ Li
|
Epidemics |
| A Hypothesis-Free Bridging of Disease Dynamics and Non-pharmaceutical Policies |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Sodium, Added Sugar and Saturated Fat Intake in Relation to Mortality and Cardiovascular Disease Events in Adults: Canadian National Nutrition Survey Linked with Vital Statistics and Health Administrative Databases |
Doug Manuel
|
British Journal of Nutrition |
| Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States |
Dean Karlen,
Dean Karlen
|
Proceedings of the National Academy of Sciences of the United States of America |
| Diversifying stem cell debates: Including Muslim contexts and perspectives |
Timothy Caulfield
|
Stem Cell Reports |
| Network analysis of Standardbred horse movements between racetracks in Canada and the United States in 2019: Implications for disease spread and control |
Amy Greer
|
Preventive Veterinary Medicine |
| SARS-CoV-2 seroprevalence among Vancouver public school staff in British Columbia, Canada: A cross-sectional study |
Daniel Coombs
|
BMJ Open |
| Characterizing posttraumatic stress disorder in primary care using electronic medical records: a retrospective cohort study |
Tyler Williamson,
Tyler Williamson
|
Annals of family medicine |
| One child, one appointment: how institutional discourses organize the work of parents and nurses in the provision of childhood vaccination for First Nations children |
Larry Svenson
|
Human Vaccines and Immunotherapeutics |
| The territories: Inverting innovation for Canada's north |
Sara McPhee-Knowles
|
Ideas, Institutions, and Interests: The Drivers of Canadian Provincial Science, Technology, and Innovation Policy |
| Tracking Public Attitudes Toward COVID-19 Vaccination on Tweets in Canada: Using Aspect-Based Sentiment Analysis |
Naveed Janjua
|
Journal of Medical Internet Research |
| Addressing Privacy Concerns in Sharing Viral Sequences and Minimum Contextual Data in a Public Repository During the COVID-19 Pandemic |
Sandrine Moreira
|
Frontiers in Genetics |
| Sharpening the Universality of Network Resilience Patterns using Motifs |
Sean Cornelius
|
Journal of Physics: Conference Series |
| Transmission Dynamics of COVID-19 |
Daniel Coombs
|
World Scientific Series in Global Health Economics and Public Policy |
| Staphylococcus aureus bacteraemia mortality: a systematic review and meta-analysis |
Mark Loeb
|
Clinical Microbiology and Infection |
| Nutritionally rich wildflower patches adjacent to nutritionally deficient crops significantly increase pollination services |
Rebecca Tyson
|
Ecological Modelling |
| Disease transmission and mass gatherings: a case study on meningococcal infection during Hajj |
Julien Arino
|
BMC Infectious Diseases |
| Recalibrated estimates of non-bacteremic and bacteremic pneumococcal community acquired pneumonia in hospitalized Canadian adults from 2010 to 2017 with addition of an extended spectrum serotype-specific urine antigen detection assay |
Mark Loeb
|
Vaccine |
| Construction status and prospects of the Hyper-Kamiokande project |
Dean Karlen
|
Proceedings of Science |
| Prospects for neutrino astrophysics with Hyper-Kamiokande |
Dean Karlen
|
Proceedings of Science |
| LAG-1: A dynamic, integrative model of learning, attention, and gaze |
Paul Tupper
|
PloS one |
| The Importance of and Challenges with Adopting Life-Cycle Regulation and Reimbursement in Canada |
Christopher McCabe
|
Healthcare policy = Politiques de sante |
| In-Hospital Macro-, Meso-, and Micro-Drivers and Interventions for Antibiotic Use and Resistance: A Rapid Evidence Synthesis of Data from Canada and Other OECD Countries |
Mark Loeb
|
Canadian Journal of Infectious Diseases and Medical Microbiology |
| Increased risk of SARS-CoV-2 reinfection associated with emergence of Omicron in South Africa |
Jonathan Dushoff
|
Science |
| COVID-19 and Vitamin D Misinformation on YouTube: Content Analysis |
Timothy Caulfield
|
JMIR Infodemiology |
| Reducing readmission rates for individuals discharged from acute psychiatric care in Alberta using peer and text message support: Protocol for an innovative supportive program |
Christopher McCabe
|
BMC Health Services Research |
| Impact of an addiction medicine consult team intervention in a Canadian inner city hospital on acute care utilization: a pragmatic quasi-experimental study |
Christopher McCabe
|
Substance Abuse: Treatment, Prevention, and Policy |
| Energy-based step selection analysis: Modelling the energetic drivers of animal movement and habitat use |
Mark Lewis
|
Journal of Animal Ecology |
| The diagonal approach: A theoretic framework for the economic evaluation of vertical and horizontal interventions in healthcare |
Jeff Round
|
Social Science and Medicine |
| Comparison of mortality hazard ratios associated with health behaviours in Canada and the United States: a population-based linked health survey study |
Doug Manuel
|
BMC Public Health |
| A Glyphosate-Based Herbicide Cross-Selects for Antibiotic Resistance Genes in Bacterioplankton Communities |
Jesse Shapiro
|
mSystems |
| Routinized Syphilis Screening Among Men Living With Human Immunodeficiency Virus: A Stepped Wedge Cluster Randomized Controlled Trial |
David Fisman,
Sharmistha Mishra
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| The Association Between Self-Reported Non-Injection Cocaine Use and Hepatitis C in the United States: An Analysis of the National Health and Nutrition Examination Survey |
David Fisman
|
Journal of studies on alcohol and drugs |
| An observational cohort study of health outcomes and costs associated with early pregnancy assessment units in the UK |
Jeff Round
|
BMC Health Services Research |
| Sporadic SARS-CoV-2 cases at the neighbourhood level in Toronto, Ontario, 2020: a spatial analysis of the early pandemic period |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
CMAJ open |
| PSMA PET/CT guided intensification of therapy in patients at risk of advanced prostate cancer (PATRON): a pragmatic phase III randomized controlled trial |
Christopher McCabe
|
BMC Cancer |
| Primary Care: The Actual Intelligence Required for Artificial Intelligence to Advance Health Care and Improve Health |
Tyler Williamson
|
JMIR Medical Informatics |
| Past dynamics of HIV transmission among men who have sex with men in Montréal, Canada: a mathematical modeling study |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
BMC Infectious Diseases |
| Transmission dynamics are crucial to COVID-19 vaccination policy |
Benjamin Bolker,
Caroline Colijn,
Jonathan Dushoff,
David Earn
|
Proceedings of the National Academy of Sciences of the United States of America |
| Acceleration of plague outbreaks in the second pandemic |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Proceedings of the National Academy of Sciences of the United States of America |
| Forward-looking serial intervals correctly link epidemic growth to reproduction numbers |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Proceedings of the National Academy of Sciences of the United States of America |
| Event-specific interventions to minimize COVID-19 transmission |
Caroline Colijn,
Paul Tupper
|
Proceedings of the National Academy of Sciences of the United States of America |
| Awareness-driven behavior changes can shift the shape of epidemics away from peaks and toward plateaus, shoulders, and oscillations |
Jonathan Dushoff
|
Proceedings of the National Academy of Sciences of the United States of America |
| Asymptomatic infection is the pandemic’s dark matter |
David Fisman,
Ashleigh Tuite
|
Proceedings of the National Academy of Sciences of the United States of America |
| Direct financial assistance for improved maternal and child health data: a pilot study supporting the health management information system in Malawi |
Diego Bassani
|
BMC Health Services Research |
| Human ectoparasite transmission of the plague during the Second Pandemic is only weakly supported by proposed mathematical models |
Benjamin Bolker,
David Earn
|
Proceedings of the National Academy of Sciences of the United States of America |
| Cystic fibrosis heterozygosity: Carrier state or haploinsufficiency? |
David Fisman
|
Proceedings of the National Academy of Sciences of the United States of America |
| The dags of war |
David Fisman
|
Proceedings of the National Academy of Sciences of the United States of America |
| Pharmacogenetics and progression to neovascular age-related macular degeneration-Evidence supporting practice change |
Rafal Kustra
|
Proceedings of the National Academy of Sciences of the United States of America |
| A unifying framework for the transient parasite dynamics of migratory hosts |
Mark Lewis
|
Proceedings of the National Academy of Sciences of the United States of America |
| Resource limitation prevents the emergence of drug resistance by intensifying within-host competition |
Troy Day
|
Proceedings of the National Academy of Sciences of the United States of America |
| CFH and ARMS2 genetic risk determines progression to neovascular age-related macular degeneration after antioxidant and zinc supplementation |
Rafal Kustra
|
Proceedings of the National Academy of Sciences of the United States of America |
| 10-Year Trends in Healthcare Spending among Patients with Schizophrenia in Alberta, Canada |
Tyler Williamson
|
Canadian Journal of Psychiatry |
| Dispensability of Escherichia coli's latent pathways |
Sean Cornelius
|
Proceedings of the National Academy of Sciences of the United States of America |
| Stochastic branching-diffusion models for gene expression |
Paul Tupper
|
Proceedings of the National Academy of Sciences of the United States of America |
| Reporting of Model Performance and Statistical Methods in Studies That Use Machine Learning to Develop Clinical Prediction Models: Protocol for a Systematic Review |
Tyler Williamson
|
JMIR Research Protocols |
| The Anti-Coronavirus Therapies (ACT) Trials: Design, Baseline Characteristics, and Challenges |
Mark Loeb
|
CJC Open |
| The Impact of Current Opioid Agonist Therapy on Hepatitis C Virus Treatment Initiation among People Who Use Drugs from the Direct-acting Antiviral (DAA) Era: A Population-Based Study |
Naveed Janjua
|
Clinical Infectious Diseases |
| Health-related quality of life of female sex workers living with HIV in South Africa: a cross-sectional study |
Sharmistha Mishra
|
Journal of the International AIDS Society |
| Gaps in hepatitis C virus prevention and care for HIV-hepatitis C virus co-infected people who inject drugs in Canada |
Mathieu Maheu-Giroux
|
International Journal of Drug Policy |
| Panel on Simulation Modeling for Covid-19 |
Dionne Aleman,
Alexander Rutherford
|
Proceedings - Winter Simulation Conference |
| Estimating SARS-CoV-2 Seroprevalence in Canadian Blood Donors, April 2020 to March 2021: Improving Accuracy with Multiple Assays |
David Fisman,
Ashleigh Tuite
|
Microbiology Spectrum |
| Stringency of containment and closures on the growth of SARS-CoV-2 in Canada prior to accelerated vaccine roll-out |
Mathieu Maheu-Giroux,
Sharmistha Mishra,
Tyler Williamson
|
International Journal of Infectious Diseases |
| Defining a Core Data Set for the Economic Evaluation of Precision Oncology |
Christopher McCabe
|
Value in Health |
| A Systematic Evaluation of Supervised Machine Learning Algorithms for Cell Phenotype Classification Using Single-Cell RNA Sequencing Data |
Xuekui Zhang
|
Frontiers in Genetics |
| Parental Population Range Expansion before Secondary Contact Promotes Heterosis |
Sarah Otto
|
American Naturalist |
| RESEARCH ARTICLE Phylogeography and transmission of M. tuberculosis in Moldova: A prospective genomic analysis |
Caroline Colijn
|
PLoS Medicine |
| British Columbia’s Index of Multiple Deprivation for Community Health Service Areas |
Naveed Janjua
|
Data |
| Community-Acquired Pneumonia in Canada during Coronavirus Disease 2019 |
Mark Loeb
|
Open Forum Infectious Diseases |
| Population Genomics Approaches for Genetic Characterization of SARS-CoV-2 Lineages |
Jesse Shapiro
|
Frontiers in Medicine |
| SuPART: Supervised projective adapted resonance theory for automatic quality assurance approval of radiotherapy treatment plans |
Dionne Aleman
|
Physics in Medicine and Biology |
| Global change in hepatitis C virus prevalence and cascade of care between 2015 and 2020: a modelling study |
Naveed Janjua
|
The Lancet Gastroenterology and Hepatology |
| Global, regional, and national prevalence estimates of physical or sexual, or both, intimate partner violence against women in 2018 |
Mathieu Maheu-Giroux
|
The Lancet |
| Novel informatics approaches to COVID-19 Research: From methods to applications |
David Buckeridge
|
Journal of Biomedical Informatics |
| Healthy food prescription incentive programme for adults with type 2 diabetes who are experiencing food insecurity: Protocol for a randomised controlled trial, modelling and implementation studies |
Tyler Williamson
|
BMJ Open |
| Geographic concentration of SARS-CoV-2 cases by social determinants of health in metropolitan areas in Canada: a cross-sectional study |
Marc Brisson,
David Buckeridge,
Naveed Janjua,
Rafal Kustra,
Mathieu Maheu-Giroux,
Sharmistha Mishra,
Tyler Williamson
|
CMAJ |
| Genion, an accurate tool to detect gene fusion from long transcriptomics reads |
Cedric Chauve
|
BMC Genomics |
| Oxidation to Control Cyanobacteria and Cyanotoxins in Drinking Water Treatment Plants: Challenges at the Laboratory and Full‐Scale Plants |
Jesse Shapiro
|
Water (Switzerland) |
| Duration and cost-effectiveness of hepatocellular carcinoma surveillance in hepatitis C patients after viral eradication |
Naveed Janjua
|
Journal of Hepatology |
| Estimating naloxone need in the USA across fentanyl, heroin, and prescription opioid epidemics: a modelling study |
Daniel Coombs
|
The Lancet Public Health |
| Modelling vaccination strategies for COVID-19 |
Caroline Wagner
|
Nature Reviews Immunology |
| Ranavirus Amplification in Low-Diversity Amphibian Communities |
Amy Greer
|
Frontiers in Veterinary Science |
| Socioeconomic position and consumption of sugary drinks, sugar-sweetened beverages and 100% juice among Canadians: a cross-sectional analysis of the 2015 Canadian Community Health Survey–Nutrition |
Doug Manuel
|
Canadian Journal of Public Health |
| Describing, Modelling and Forecasting the Spatial and Temporal Spread of COVID-19: A Short Review |
Julien Arino
|
Fields Institute Communications |
| Evaluating the Risk of Reopening the Border: A Case Study of Ontario (Canada) to New York (USA) Using Mathematical Modeling |
Julien Arino
|
Fields Institute Communications |
| Don’t Wait, Re-escalate: Delayed Action Results in Longer Duration of COVID-19 Restrictions |
Amy Hurford
|
Fields Institute Communications |
| SARS-CoV-2 Omicron Spike recognition by plasma from individuals receiving BNT162b2 mRNA vaccination with a 16-week interval between doses |
Sandrine Moreira
|
Cell Reports |
| A Conceptual Framework for Life-Cycle Health Technology Assessment |
Christopher McCabe,
Jeff Round
|
Value in Health |
| The Aging, Community and Health Research Unit Community Partnership Program (ACHRU-CPP) for older adults with diabetes and multiple chronic conditions: study protocol for a randomized controlled trial |
Tyler Williamson
|
BMC Geriatrics |
| Transmission of SARS-CoV-2: still up in the air – Authors' reply |
David Fisman
|
The Lancet |
| CFH and ARMS2 polymorphisms interact with zinc supplements in cognitive impairment in the women's health initiative hormone trial |
Rafal Kustra
|
Journal of Alzheimer's Disease |
| Inactivated and live-attenuated seasonal influenza vaccines boost broadly neutralizing antibodies in children |
Mark Loeb
|
Cell Reports Medicine |
| Comparing microscopy and DNA metabarcoding techniques for identifying cyanobacteria assemblages across hundreds of lakes |
Jesse Shapiro
|
Harmful Algae |
| Operational assessment tool for forest carbon dynamics for the United States: a new spatially explicit approach linking the LUCAS and CBM-CFS3 models |
Colin Daniel
|
Carbon Balance and Management |
| Sex differences in comorbidity at diagnosis of multiple sclerosis |
Larry Svenson
|
Neurology |
| Development of the Standards of Reporting of Neurological Disorders (STROND) checklist: A guideline for the reporting of inciden ce and prevalence studies in neuroe pidemiology |
Larry Svenson
|
Neurology |
| The role of prisons in disseminating tuberculosis in Brazil: A genomic epidemiology study |
Caroline Colijn
|
The Lancet Regional Health - Americas |
| Inferring global-scale temporal latent topics from news reports to predict public health interventions for COVID-19 |
David Buckeridge
|
Patterns |
| Genome Canada precision medicine strategy for structured national implementation of epitope matching in renal transplantation |
Timothy Caulfield
|
Human Immunology |
| Exploring social inequalities in healthcare trajectories following diagnosis of diabetes: a state sequence analysis of linked survey and administrative data |
David Buckeridge
|
BMC Health Services Research |
| A Fisher–KPP Model with a Nonlocal Weighted Free Boundary: Analysis of How Habitat Boundaries Expand, Balance or Shrink |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Savannas are vital but overlooked carbon sinks |
Sarah Otto
|
Science |
| Population sizes, HIV prevalence, and HIV prevention among men who paid for sex in sub-Saharan Africa (2000-2020): A metaanalysis of 87 population-based surveys |
Mathieu Maheu-Giroux
|
PLoS Medicine |
| Deep ROC Analysis and AUC as Balanced Average Accuracy, for Improved Classifier Selection, Audit and Explanation |
Doug Manuel
|
IEEE Transactions on Pattern Analysis and Machine Intelligence |
| Fine-Scale Adaptations to Environmental Variation and Growth Strategies Drive Phyllosphere Methylobacterium Diversity |
Jesse Shapiro
|
mBio |
| Impact of the COVID-19 pandemic on vaccine coverage for early childhood vaccines in Alberta, Canada: A population-based retrospective cohort study |
Larry Svenson
|
BMJ Open |
| Long-term Functional Outcomes among Older Adults Undergoing Video-assisted Versus Open Surgery for Lung Cancer: A Population-based Cohort Study |
Doug Manuel
|
Annals of Surgery |
| Validity of ICD-10 codes for COVID-19 patients with hospital admissions or ED visits in Canada: A retrospective cohort study |
Tyler Williamson
|
BMJ Open |
| Research, Digital Health Information and Promises of Privacy: Revisiting the Issue of Consent |
Timothy Caulfield
|
Canadian Journal of Bioethics |
| Multi-stage graph peeling algorithm for probabilistic core decomposition |
Xuekui Zhang
|
Proceedings of the 2021 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2021 |
| Integrative COVID-19 biological network inference with probabilistic core decomposition |
Xuekui Zhang
|
Briefings in Bioinformatics |
| Reconsenting paediatric research participants for use of identifying data |
Timothy Caulfield
|
Journal of Medical Ethics |
| Coupling the socio-economic and ecological dynamics of cyanobacteria: Single lake and network dynamics |
Mark Lewis
|
Ecological Economics |
| Chemsex and incidence of sexually transmitted infections among Canadian pre-exposure prophylaxis (PrEP) users in the l'Actuel PrEP Cohort (2013-2020) |
Mathieu Maheu-Giroux
|
Sexually Transmitted Infections |
| COVID-19 Vaccination Uptake Among Individuals With Immune-mediated Inflammatory Diseases in Ontario, Canada, Between December 2020 and October 2021: A Population-based Analysis |
Larry Svenson
|
Journal of Rheumatology |
| HCC incidence after hepatitis C cure among patients with advanced fibrosis or cirrhosis: A meta-analysis |
Naveed Janjua
|
Hepatology |
| Antigenicity of the Mu (B.1.621) and A.2.5 SARS-CoV-2 Spikes |
Sandrine Moreira
|
Viruses |
| Innovative vaccine approaches—a Keystone Symposia report |
Caroline Wagner
|
Annals of the New York Academy of Sciences |
| Quantifying transmissibility of SARS-CoV-2 and impact of intervention within long-term healthcare facilities |
Caroline Colijn,
Daniel Coombs,
Naveed Janjua
|
Royal Society Open Science |
| Association between Prescription Opioid Therapy for Noncancer Pain and Hepatitis C Virus Seroconversion |
Naveed Janjua
|
JAMA Network Open |
| Canadian Dairy Network for Antimicrobial Stewardship and Resistance (CaDNetASR): An On-Farm Surveillance System |
Javier Sanchez
|
Frontiers in Veterinary Science |
| Analyzing natural herd immunity media discourse in the United Kingdom and the United States |
Timothy Caulfield
|
PLOS Global Public Health |
| Comparison of longitudinal trends in self-reported symptoms and COVID-19 case activity in Ontario, Canada |
David Fisman,
Ashleigh Tuite
|
PLoS ONE |
| Transient prophylaxis and multiple epidemic waves |
Rebecca Tyson
|
AIMS Mathematics |
| Is it possible to recruit HIV self-test users for an anonymous phone-based survey using passive recruitment without financial incentives? Lessons learned from a pilot study in Côte d’Ivoire |
Mathieu Maheu-Giroux
|
Pilot and Feasibility Studies |
| Modeling the early transmission of COVID-19 in New York and San Francisco using a pairwise network model |
Mark Lewis
|
Infectious Disease Modelling |
| The prevalence of Cyclospora cayetanensis in water: A systematic review and meta-analysis |
Amy Greer
|
Epidemiology and Infection |
| Real world evidence of the association between medication and life expectancy in elderly inflammatory bowel disease: a population-based cohort study |
Doug Manuel
|
BMC Gastroenterology |
| COVID-19: Yukon’s experience with travel restriction and the unvaccinated |
Lisa Kanary,
Sara McPhee-Knowles
|
Canada Communicable Disease Report |
| The role of digital tools in the delivery of genomic medicine: enhancing patient-centered care |
Timothy Caulfield
|
Genetics in Medicine |
| Effectiveness of the Genomics ADvISER decision aid for the selection of secondary findings from genomic sequencing: a randomized clinical trial |
Timothy Caulfield
|
Genetics in Medicine |
| CRISPR in the North American popular press |
Timothy Caulfield
|
Genetics in Medicine |
| Potential of polygenic risk scores for improving population estimates of women’s breast cancer genetic risks |
Michael Wolfson
|
Genetics in Medicine |
| Foreword |
Timothy Caulfield
|
Communication and Health: Media, Marketing and Risk |
| An epidemiological approach to studying building indoor climate |
David Fisman
|
17th International Conference on Indoor Air Quality and Climate, INDOOR AIR 2022 |
| Effect of Colchicine vs Usual Care Alone on Intubation and 28-Day Mortality in Patients Hospitalized with COVID-19: A Randomized Clinical Trial |
Mark Loeb
|
JAMA Network Open |
| A pilot case-control study of the social media activity following cluster and non-cluster suicides in Australia |
Nathaniel Osgood
|
International Journal of Environmental Research and Public Health |
| Adaptive data-driven age and patch mixing in contact networks with recurrent mobility |
Sharmistha Mishra
|
MethodsX |
| The contrast between clear and plain speaking style for Mandarin tones |
Paul Tupper
|
Journal of the Acoustical Society of America |
| Covid-19 seroprevalence in canada modelling waning and boosting covid-19 immunity in canada a canadian immunization research network study |
David Buckeridge
|
Vaccines |
| Declining incidence of hepatitis C related hepatocellular carcinoma in the era of interferon-free therapies: A population-based cohort study |
Naveed Janjua
|
Liver International |
| Disease-modifying drugs for multiple sclerosis and subsequent health service use |
Larry Svenson
|
Multiple Sclerosis Journal |
| Network science inspires novel tree shape statistics |
Caroline Colijn
|
PLoS ONE |
| COVID-19 pandemic impact on childhood vaccination coverage in Quebec, Canada |
Larry Svenson
|
Human Vaccines and Immunotherapeutics |
| Rotational worker vaccination provides indirect protection to vulnerable groups in regions with low COVID-19 prevalence |
Amy Hurford
|
AIMS Mathematics |
| Repeated measures discriminant analysis using multivariate generalized estimation equations |
Tyler Williamson
|
Statistical Methods in Medical Research |
| The frequency of interleukin-1β-producing monocytes is significantly associated with varicella-zoster responses of nursing home residents |
Mark Loeb
|
Clinical and Experimental Immunology |
| Combined Clinical Audits and Low-Dose, High-frequency, In-service Training of Health Care Providers and Community Health Workers to Improve Maternal and Newborn Health in Mali: Protocol for a Pragmatic Cluster Randomized Trial |
Diego Bassani
|
JMIR Research Protocols |
| Family and child risk factors for early-life RSV illness |
David Fisman
|
Pediatrics |
| Opportunities to Enhance Linkage to Hepatitis C Care Among Hospitalized People With Recent Drug Dependence in New South Wales, Australia: A Population-based Linkage Study |
Naveed Janjua
|
Clinical Infectious Diseases |
| The evolution of age-specific choosiness and reproductive isolation in a model with overlapping generations |
Troy Day
|
Evolution |
| Bayesian clustering for continuous-time hidden Markov models |
David Buckeridge
|
Canadian Journal of Statistics |
| Special Collection: Celebrating J.D. Murray’s Contributions to Mathematical Biology |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Breastfeeding and maternal cardiovascular risk factors: 1982 Pelotas Birth Cohort |
Diego Bassani
|
Scientific Reports |
| Quality of life drives patients’ preferences for secondary findings from genomic sequencing |
Timothy Caulfield
|
European Journal of Human Genetics |
| Development of patient “profiles” to tailor counseling for incidental genomic sequencing results |
Timothy Caulfield
|
European Journal of Human Genetics |
| Negative frequency-dependent selection and asymmetrical transformation stabilise multi-strain bacterial population structures |
Caroline Colijn
|
ISME Journal |
| Fundamental limitations of contact tracing for COVID-19 |
Caroline Colijn,
Sarah Otto,
Paul Tupper
|
Facets |
| Designing ecologically optimized pneumococcal vaccines using population genomics |
Caroline Colijn
|
Nature Microbiology |
| Limitations of Qdot labelling compared to directly-conjugated probes for single particle tracking of B cell receptor mobility |
Daniel Coombs
|
Scientific Reports |
| Evolution of cooperation on temporal networks |
Sean Cornelius
|
Nature Communications |
| Realistic control of network dynamics |
Sean Cornelius
|
Nature Communications |
| Female plasticity tends to reduce sexual conflict |
Troy Day
|
Nature Ecology and Evolution |
| Modeling shield immunity to reduce COVID-19 epidemic spread |
Jonathan Dushoff
|
Nature Medicine |
| Couple serostatus patterns in sub-Saharan Africa illuminate the relative roles of transmission rates and sexual network characteristics in HIV epidemiology |
Jonathan Dushoff
|
Scientific Reports |
| A sub-national real-time epidemiological and vaccination database for the COVID-19 pandemic in Canada |
David Fisman,
Amy Greer,
Shelby Sturrock,
Ashleigh Tuite
|
Scientific Data |
| Social vulnerability in persons with chronic hepatitis C virus infection is associated with a higher risk of prescription opioid use |
Naveed Janjua
|
Scientific Reports |
| Extended fisheries recovery timelines in a changing environment |
Lisa Kanary
|
Nature Communications |
| Constraint on the matter–antimatter symmetry-violating phase in neutrino oscillations |
Dean Karlen,
Dean Karlen
|
Nature |
| 5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary |
Rafal Kustra
|
Nature Structural and Molecular Biology |
| Accurate long-range forecasting of COVID-19 mortality in the USA |
Mark Lewis
|
Scientific Reports |
| Factors governing outbreak dynamics in a forest intensively managed for mountain pine beetle |
Mark Lewis
|
Scientific Reports |
| Cost-effectiveness analysis of multigene expression profiling assays to guide adjuvant therapy decisions in women with invasive early-stage breast cancer |
Christopher McCabe
|
Pharmacogenomics Journal |
| Addendum: Low-value approvals and high prices might incentivize ineffective drug development |
Christopher McCabe
|
Nature reviews. Clinical oncology |
| Low-value approvals and high prices might incentivize ineffective drug development |
Christopher McCabe
|
Nature Reviews Clinical Oncology |
| Keeping it complicated: Mitochondrial genome plasticity across diplonemids |
Sandrine Moreira
|
Scientific Reports |
| A dynamic modelling analysis of the impact of tobacco control programs on population-level nicotine dependence |
Nathaniel Osgood
|
Scientific Reports |
| Potential group B Streptococcus interspecies transmission between cattle and people in Colombian dairy farms |
Javier Sanchez
|
Scientific Reports |
| Community rescue in experimental phytoplankton communities facing severe herbicide pollution |
Jesse Shapiro
|
Nature Ecology and Evolution |
| Coherence of Microcystis species revealed through population genomics |
Jesse Shapiro
|
ISME Journal |
| The population genetics of pangenomes |
Jesse Shapiro
|
Nature Microbiology |
| The limits of SARS-CoV-2 predictability |
Caroline Wagner
|
Nature Ecology and Evolution |
| Epidemic dynamics of respiratory syncytial virus in current and future climates |
Caroline Wagner
|
Nature Communications |
| Probing the potential of mucus permeability to signify preterm birth risk |
Caroline Wagner
|
Scientific Reports |
| Chronic obstructive pulmonary disease as a risk factor in primary care: a Canadian retrospective cohort study |
Tyler Williamson
|
npj Primary Care Respiratory Medicine |
| Model-based clustering for identifying disease-associated SNPs in case-control genome-wide association studies |
Xuekui Zhang
|
Scientific Reports |
| High-temporal-resolution view of transcription and chromatin states across distinct metabolic states in budding yeast |
Xuekui Zhang
|
Nature Structural and Molecular Biology |
| A novel multiplex electrochemiluminescent immunoassay for detection and quantification of anti-SARS-CoV-2 IgG and anti-seasonal endemic human coronavirus IgG |
Natalie Prystajecky
|
Journal of Clinical Virology |
| Comparing reliability of ICD-10-based COVID-19 comorbidity data to manual chart review, a retrospective cross-sectional study |
Michael WZ Li
|
Journal of Medical Virology |
| Differences in the organisation of early pregnancy units and the effect of senior clinician presence, volume of patients and weekend opening on emergency hospital admissions: Findings from the VESPA Study |
Jeff Round
|
PLoS ONE |
| Understanding machine learning classifier decisions in automated radiotherapy quality assurance |
Dionne Aleman
|
Physics in Medicine and Biology |
| A Universal Separable Diversity |
Paul Tupper
|
Analysis and Geometry in Metric Spaces |
| An app-based mindfulness-based self-compassion program to support caregivers of people with dementia: Participatory feasibility study |
Nathaniel Osgood
|
JMIR Aging |
| Rural vs urban inequalities in stage at diagnosis for lung cancer |
Nathaniel Osgood
|
Cancer Treatment and Research Communications |
| Fixation and effective size in a haploid–diploid population with asexual reproduction |
Sarah Otto
|
Theoretical Population Biology |
| Cross-sectional study of antimicrobial use and treatment decision for preweaning Canadian dairy calves |
Javier Sanchez
|
JDS Communications |
| Correction to: A Population-Based Analysis of Long-Term Outcomes Among Older Adults Requiring Unexpected Intensive Care Unit Admission After Cancer Surgery (Annals of Surgical Oncology, (2021), 28, 12, (7014-7024), 10.1245/s10434-021-10705-8) |
Doug Manuel
|
Annals of Surgical Oncology |
| Tobacco messages encountered in real-time among low socio-economic position groups: a descriptive study |
Nathaniel Osgood
|
BMC Public Health |
| Stunting: Prevalence and prevention |
Diego Bassani
|
Encyclopedia of Human Nutrition: Volume 1-4, Fourth Edition |
| A multi-country investigation of influenza vaccine coverage in pregnant individuals, 2010–2016 |
Larry Svenson
|
Vaccine |
| Prescription opioid treatment for non-cancer pain and initiation of injection drug use: Large retrospective cohort study |
Naveed Janjua
|
The BMJ |
| Users’ perceptions about receiving personalized depression risk information: findings from a qualitative study |
Doug Manuel
|
BMC Psychiatry |
| The Impact of COVID-19 on Outpatient Antibiotic Prescriptions in Ontario, Canada; An Interrupted Time Series Analysis |
Doug Manuel
|
Open Forum Infectious Diseases |
| Genic Selection Within Prokaryotic Pangenomes |
Jesse Shapiro
|
Genome biology and evolution |
| The economics of managing evolution |
Troy Day
|
PLoS Biology |
| Learning Quantities of Interest from dynamical systems for observation-consistent inversion |
Donald Estep
|
Computer Methods in Applied Mechanics and Engineering |
| Population health surveillance using mobile phone surveys in low- And middle-income countries: Methodology and sample representativeness of a cross-sectional survey of live poultry exposure in bangladesh |
David Fisman,
Amy Greer
|
JMIR Public Health and Surveillance |
| Strategies for working across Canadian practice-based research and learning networks (PBRLNs) in primary care: focus on frailty |
Tyler Williamson
|
BMC Family Practice |
| Frequency and patterns of exposure to live poultry and the potential risk of avian influenza transmission to humans in urban Bangladesh |
David Fisman,
Amy Greer
|
Scientific Reports |
| Quantifying contact patterns in response to COVID-19 public health measures in Canada |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
BMC Public Health |
| Evaluating the relationship between myocarditis and mRNA vaccination |
Mark Loeb
|
Expert Review of Vaccines |
| Memory-guided foraging and landscape design interact to determine ecosystem services |
Rebecca Tyson
|
Journal of Theoretical Biology |
| Spatio-Temporal Variation in the Prevalence of Major Mastitis Pathogens Isolated From Bovine Milk Samples Between 2008 and 2017 in Ontario, Canada |
Amy Greer
|
Frontiers in Veterinary Science |
| Mental health and substance use associated with hospitalization among people with COVID-19: A population-based cohort study |
Naveed Janjua,
Natalie Prystajecky
|
Viruses |
| Establishing healthcare worker performance and safety in providing critical care for patients in a simulated ebola treatment unit: Non-randomized pilot study |
Sharmistha Mishra
|
Viruses |
| Opioid prescribing among new users for non-cancer pain in the USA, Canada, UK, and Taiwan: A population-based cohort study |
David Buckeridge
|
PLoS Medicine |
| Association of demographic, career, and lifestyle factors with resilience and association of resilience with mental health outcomes in veterinarians in Canada |
Amy Greer
|
Journal of the American Veterinary Medical Association |
| COVID-19 in an immunocompromised host: persistent shedding of viable SARS-CoV-2 and emergence of multiple mutations: a case report |
Natalie Prystajecky
|
International Journal of Infectious Diseases |
| Mutations in emerging variant of concern lineages disrupt genomic sequencing of SARS-CoV-2 clinical specimens |
Natalie Prystajecky
|
International Journal of Infectious Diseases |
| Risk of cardiovascular diseases in relation to substance use disorders |
Naveed Janjua
|
Drug and Alcohol Dependence |
| Detecting seasonal episodic-like spatio-temporal memory patterns using animal movement modelling |
Mark Lewis
|
Methods in Ecology and Evolution |
| A small number of early introductions seeded widespread transmission of SARS-CoV-2 in Québec, Canada |
Sandrine Moreira,
Jesse Shapiro
|
Genome Medicine |
| Evaluating Montreál's harm reduction interventions for people who inject drugs: Protocol for observational study and cost-effectiveness analysis |
David Buckeridge,
Mathieu Maheu-Giroux
|
BMJ Open |
| Derivation and Internal Validation of a Model to Predict the Probability of Severe Acute Respiratory Syndrome Coronavirus-2 Infection in Community People |
Doug Manuel
|
Journal of General Internal Medicine |
| Adjuvanted trivalent influenza vaccine versus quadrivalent inactivated influenza vaccine in Hutterite Children: A randomized clinical trial |
David Earn,
Mark Loeb
|
Vaccine |
| Optimization of magnetic bead-based nucleic acid extraction for SARS-CoV-2 testing using readily available reagents |
Natalie Prystajecky
|
Journal of Virological Methods |
| Adolescents’ experiences with group antenatal care: Insights from a mixed-methods study in Senegal |
Diego Bassani
|
Tropical Medicine and International Health |
| Resistance of SARS-CoV-2 beta and gamma variants to plasma collected from Canadian blood donors during the spring of 2020 |
David Fisman,
Ashleigh Tuite
|
Transfusion |
| Changing patterns of disease severity in blastomyces dermatitidis infection, quebec, canada |
Sandrine Moreira
|
Emerging Infectious Diseases |
| Rapid increase in sars-cov-2 p.1 lineage leading to codominance with b.1.1.7 lineage, british columbia, canada, january-april 2021 |
Natalie Prystajecky
|
Emerging Infectious Diseases |
| Length of Stay and Home Discharge for Patients with Inpatient Stroke Rehabilitation |
Jeff Round
|
Canadian Journal of Neurological Sciences |
| Measurement of the charged-current electron (anti-)neutrino inclusive cross-sections at the T2K off-axis near detector ND280 |
Dean Karlen,
Dean Karlen
|
Journal of High Energy Physics |
| Effect of inactivated influenza vaccination on human coronavirus infection: Secondary analysis of a randomized trial in Hutterite colonies |
Mark Loeb
|
Vaccine |
| Enthusiasm for Introducing and Integrating HIV Self-Testing but Doubts About Users: A Baseline Qualitative Analysis of Key Stakeholders' Attitudes and Perceptions in Côte d'Ivoire, Mali and Senegal |
Mathieu Maheu-Giroux
|
Frontiers in Public Health |
| Assessing multiplex tiling PCR sequencing approaches for detecting genomic variants of SARS-CoV-2 in municipal wastewater |
Natalie Prystajecky
|
mSystems |
| Dynamic Computational Models and Simulations of the Opioid Crisis: A Comprehensive Survey |
Nathaniel Osgood
|
ACM Transactions on Computing for Healthcare |
| Confidence interval of risk difference by different statistical methods and its impact on the study conclusion in antibiotic non-inferiority trials |
Mark Loeb
|
Trials |
| Immune life history, vaccination, and the dynamics of SARS-CoV-2 over the next 5 years |
Caroline Wagner
|
Science |
| Call for transparency of COVID-19 models |
David Earn,
Nathaniel Osgood
|
Science |
| Interpersonal counselling versus perinatal-specific cognitive behavioural therapy for women with depression during pregnancy offered in routine psychological treatment services: a phase II randomised trial |
Jeff Round
|
BMC Psychiatry |
| Drug overdose and the risk of cardiovascular diseases: a nested case–control study |
Naveed Janjua
|
Clinical Research in Cardiology |
| Differential equation model for central-place foragers with memory: implications for bumble bee crop pollination |
Rebecca Tyson
|
Journal of Mathematical Biology |
| Infectious disease in an era of global change |
Caroline Wagner
|
Nature Reviews Microbiology |
| Vaccine rollout strategies: The case for vaccinating essential workers early |
Christopher McCabe,
Paul Tupper
|
PLOS Global Public Health |
| Investigate the origins of COVID-19 |
David Fisman
|
Science |
| Connect 2 Care, a Novel Community Outreach Program for Vulnerably Housed Patients With High Acute Care Use: A Mixed-Methods Study Protocol |
Tyler Williamson
|
Frontiers in Public Health |
| Methodological and Reporting Quality of Noninferiority Randomized Controlled Trials Comparing Antibiotic Therapies: A Systematic Review |
Mark Loeb
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Long time frames to detect the impact of changing COVID-19 measures, Canada, March to July 2020 |
Caroline Colijn
|
Eurosurveillance |
| Characteristics of new hiv diagnoses over 1995-2019: A clinic-based study in montréal, Canada |
Mathieu Maheu-Giroux
|
PLoS ONE |
| Small parsimony for natural genomes in the DCJ-indel model |
Cedric Chauve
|
Journal of Bioinformatics and Computational Biology |
| Consensus (Convergence of Opinion on Recommendations and Evidence [CORE]) Versus Systematic (Grading of Recommendations Assessment, Development, and Evaluation [GRADE]) Approach to Development of Guidelines for Community-acquired Pneumonia |
Mark Loeb
|
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America |
| Phase tipping: How cyclic ecosystems respond to contemporary climate |
Rebecca Tyson
|
Proceedings of the Royal Society B: Biological Sciences |
| Response |
Caroline Wagner
|
Science |
| Evaluation of the relative virulence of novel SARS-CoV-2 variants: a retrospective cohort study in Ontario, Canada |
David Fisman,
Ashleigh Tuite
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Evaluation of the clinical and analytical performance of the Seegene allplex™ SARS-CoV-2 variants I assay for the detection of variants of concern (VOC) and variants of interests (VOI) |
Natalie Prystajecky
|
Journal of Clinical Virology |
| The Hydroxychloroquine Twitter War: A case study examining polarization in science communication |
Timothy Caulfield
|
First Monday |
| Risk Factors for the Incidence of and the Mortality due to Post-Transplant Lymphoproliferative Disorder after Hematopoietic Cell Transplantation |
Tyler Williamson
|
Transplantation and Cellular Therapy |
| Impact of COVID-19-related public health measures on HCV testing in British Columbia, Canada: An interrupted time series analysis |
Naveed Janjua
|
Liver International |
| Single-colony sequencing reveals microbe-by-microbiome phylosymbiosis between the cyanobacterium Microcystis and its associated bacteria |
Jesse Shapiro
|
Microbiome |
| Anal Human Papillomavirus Prevalence Among Vaccinated and Unvaccinated Gay, Bisexual, and Other Men Who Have Sex With Men in Canada |
Marc Brisson
|
Sexually Transmitted Diseases |
| Automated identification of maximal differential cell populations in flow cytometry data |
Cedric Chauve
|
Cytometry Part A |
| Antibody and cellular therapies for treatment of covid-19: A living systematic review and network meta-analysis |
Mark Loeb
|
The BMJ |
| Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) seroprevalence: Navigating the absence of a gold standard |
David Fisman,
Ashleigh Tuite
|
PLoS ONE |
| Vaccine nationalism and the dynamics and control of SARS-CoV-2 |
Caroline Wagner
|
Science |
| Population Health and COVID-19 in Canada: a Demographic Comparative Perspective |
David Fisman
|
Canadian Studies in Population |
| Modelling song popularity as a contagious process |
Benjamin Bolker,
David Earn
|
Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences |
| Refining global HIV estimates for decision-making: advances in analytic and modelling methods used by the Joint United Nations Programme on HIV/AIDS |
Mathieu Maheu-Giroux
|
Journal of the International AIDS Society |
| Psychotropic prescribing rates and pharmacogenomic testing implications for autism in the Canadian primary care sentinel surveillance network |
Tyler Williamson,
Tyler Williamson
|
Pharmacogenetics and Genomics |
| A longitudinal dataset of incidence and intervention policy impacts regarding the COVID-19 pandemic in Canadian provinces |
Mark Lewis
|
Data in Brief |
| The viral hepatitis B care cascade: A population-based comparison of immigrant groups |
Naveed Janjua,
Rafal Kustra
|
Hepatology |
| Evaluation of a preoperative personalized risk communication tool: a prospective before-and-after study |
Doug Manuel
|
Canadian Journal of Anesthesia |
| An Empiricist’s Guide to Using Ecological Theory |
Sarah Otto
|
American Naturalist |
| Should age-dependent absolute risk thresholds be used for risk stratification in risk-stratified breast cancer screening? |
Michael Wolfson
|
Journal of Personalized Medicine |
| Women in the 2019 hepatitis C cascade of care: findings from the British Columbia Hepatitis Testers cohort study |
Naveed Janjua
|
BMC Women's Health |
| Predicting insect outbreaks using machine learning: A mountain pine beetle case study |
Mark Lewis
|
Ecology and Evolution |
| Myxobolus cerebralis establishment and spread: a graphical synthesis |
Mark Lewis
|
Canadian Journal of Fisheries and Aquatic Sciences |
| Anal human papillomavirus prevalence and risk factors among men who have sex with men in Vietnam |
Marc Brisson
|
International Journal of Infectious Diseases |
| Dataset of COVID-19 outbreak and potential predictive features in the USA |
Mark Lewis
|
Data in Brief |
| Machine learning for identification of frailty in Canadian primary care practices |
Tyler Williamson
|
International Journal of Population Data Science |
| Linkage of Emergency Medical Services and Hospital Data: A Necessary Precursor to Improve Understanding of Outcomes of Prehospital Care |
Tyler Williamson
|
Prehospital Emergency Care |
| Optimal shutdown strategies for COVID-19 with economic and mortality costs: British Columbia as a case study |
Rebecca Tyson
|
Royal Society Open Science |
| Assessing the electronic evidence system needs of canadian public health professionals: Cross-sectional study |
David Buckeridge
|
JMIR Public Health and Surveillance |
| Towards Building a Sustainable Future: Positioning Ecological Modelling for Impact in Ecosystems Management |
Rebecca Tyson
|
Bulletin of Mathematical Biology |
| Modelling the introduction and transmission of Campylobacter in a North American chicken flock |
Amy Greer
|
Zoonoses and Public Health |
| Musculoskeletal injuries in Standardbred racehorses on Prince Edward Island |
Javier Sanchez
|
The Canadian veterinary journal = La revue veterinaire canadienne |
| Impact of temperature on the affinity of SARS-CoV-2 Spike glycoprotein for host ACE2 |
Sandrine Moreira
|
Journal of Biological Chemistry |
| Erratum: Functional diversity: An epistemic roadmap (BioScience DOI: 10.1093/biosci/biz089) |
Jesse Shapiro
|
BioScience |
| Trends in Interregional Travel to Shopping Malls and Restaurants before and after Differential COVID-19 Restrictions in the Greater Toronto Area |
Shelby Sturrock
|
JAMA Network Open |
| Endurance Limited Lines of Approach for a Sprinting Submarine |
Matthew MacLeod
|
Military Operations Research (United States) |
| Cefazolin versus cloxacillin as definitive antibiotic therapy for methicillin-susceptible Staphylococcus aureus spinal epidural abscess: a retrospective cohort study |
Mark Loeb
|
International Journal of Antimicrobial Agents |
| Evolution and emergence of multidrug-resistant mycobacterium tuberculosis in chisinau, moldova |
Caroline Colijn
|
Microbial Genomics |
| Monitoring non-pharmaceutical public health interventions during the COVID-19 pandemic |
David Buckeridge
|
Scientific Data |
| A Population-Based Analysis of Long-Term Outcomes Among Older Adults Requiring Unexpected Intensive Care Unit Admission After Cancer Surgery |
Doug Manuel
|
Annals of Surgical Oncology |
| A combination of metagenomic and cultivation approaches reveals hypermutator phenotypes within vibrio cholerae- infected patients |
Jesse Shapiro
|
mSystems |
| Generating community measures of food purchasing activities using store-level electronic grocery transaction records: An ecological study in Montreal, Canada |
David Buckeridge
|
Public Health Nutrition |
| Exploring the reasons for low pertussis vaccine effectiveness in Ontario, Canada, 2006–2008: a Canadian Immunization Research Network study |
Larry Svenson
|
Canadian Journal of Public Health |
| SARS-COV-2 shedding dynamics across the respiratory tract, sex, and disease severity for adult and pediatric COVID-19 |
David Fisman
|
eLife |
| Zika virus outbreak in Brazil under current and future climate |
Amy Greer
|
Epidemics |
| Effectiveness of BNT162b2 and mRNA-1273 covid-19 vaccines against symptomatic SARS-CoV-2 infection and severe covid-19 outcomes in Ontario, Canada: Test negative design study |
Naveed Janjua,
Larry Svenson
|
The BMJ |
| Physical, sexual and psychological intimate partner violence and non-partner sexual violence against women and girls: A systematic review protocol for producing global, regional and country estimates |
Mathieu Maheu-Giroux
|
BMJ Open |
| Genome Evolution in Bacteria Isolated from Million-Year-Old Subseafloor Sediment |
Jesse Shapiro
|
mBio |
| Development of a case definition for hearing loss in community-based older adults: a cross-sectional validation study |
Tyler Williamson
|
CMAJ open |
| Exploring the dynamics of workplace typologies for sex workers in Eastern Ukraine |
Sharmistha Mishra
|
Global Public Health |
| COVID-19 Case Age Distribution: Correction for Differential Testing by Age |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Annals of Internal Medicine |
| Individual and social determinants of SARS-CoV-2 testing and positivity in Ontario, Canada: A population-wide study |
Rafal Kustra,
Sharmistha Mishra
|
CMAJ |
| Fraïssé Limits for Relational Metric Structures |
Paul Tupper
|
Journal of Symbolic Logic |
| Mobile Gene Sequence Evolution within Individual Human Gut Microbiomes Is Better Explained by Gene-Specific Than Host-Specific Selective Pressures |
Jesse Shapiro
|
Genome Biology and Evolution |
| Sleeping for two: study protocol for a randomized controlled trial of cognitive behavioral therapy for insomnia in pregnant women |
Tyler Williamson
|
Trials |
| Influence of maternal excess weight before pregnancy on breastfeeding and weaning: Pooled analyses of four population-based cohorts born between 1982-2015 |
Diego Bassani
|
British Journal of Nutrition |
| Immediate and Long-Term Health Care Support Needs of Older Adults Undergoing Cancer Surgery: A Population-Based Analysis of Postoperative Homecare Utilization |
Doug Manuel
|
Annals of Surgical Oncology |
| Co-inoculation with arbuscular mycorrhizal fungi differing in carbon sink strength induces a synergistic effect in plant growth |
Rebecca Tyson
|
Journal of Theoretical Biology |
| Improving health equity and ending the HIV epidemic in the USA: a distributional cost-effectiveness analysis in six cities |
Caroline Colijn
|
The Lancet HIV |
| A large-scale assessment of lakes reveals a pervasive signal of land use on bacterial communities |
Jesse Shapiro
|
ISME Journal |
| A biomarker-guided, prospective, phase 2 trial of pre-emptive graft-versus-host disease therapy using anti-thymocyte globulin |
Tyler Williamson
|
Cytotherapy |
| Error estimation and uncertainty quantification for first time to a threshold value |
Donald Estep
|
BIT Numerical Mathematics |
| Vitamin D status among first-generation immigrants from different ethnic groups and origins: An observational study using the Canadian health measures survey |
Doug Manuel
|
Nutrients |
| Association Between Health System Factors and Utilization of Routine Laboratory Tests in Clinical Teaching Units: a Cohort Analysis |
Tyler Williamson
|
Journal of General Internal Medicine |
| Population coverage of the canadian chronic disease surveillance system: A survey of the contents of health insurance registries across Canada |
Larry Svenson
|
Health Promotion and Chronic Disease Prevention in Canada |
| Does Counting Different Life Stages Impact Estimates for Extinction Probabilities for Tsetse (Glossina spp)? |
Jonathan Dushoff
|
Bulletin of Mathematical Biology |
| Understanding why superspreading drives the COVID-19 pandemic but not the H1N1 pandemic |
David Fisman
|
The Lancet Infectious Diseases |
| Smart about Meds (SAM): A pilot randomized controlled trial of a mobile application to improve medication adherence following hospital discharge |
David Buckeridge
|
JAMIA Open |
| On inferring evolutionary stability in finite populations using infinite population models |
David Earn
|
Journal of Mathematical Biology |
| Computationally simple anisotropic lattice covariograms |
Mark Lewis
|
Environmental and Ecological Statistics |
| Supervised multi-specialist topic model with applications on large-scale electronic health record data |
David Buckeridge
|
Proceedings of the 12th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2021 |
| Consideration of antimicrobial resistance and contextual factors in infectious disease guidelines: A systematic survey |
Mark Loeb
|
BMJ Open |
| Characterization of the microbiota and resistome of bulk tank milk samples from Prince Edward Island dairy farms |
Javier Sanchez
|
Journal of Dairy Science |
| Gut health' and the microbiome in the popular press: A content analysis |
Timothy Caulfield
|
BMJ Open |
| Beaver fever: Whole-genome characterization of waterborne outbreak and sporadic isolates to study the zoonotic transmission of giardiasis |
Cedric Chauve,
Natalie Prystajecky
|
mSphere |
| Pandemic paradox: Early life H2N2 pandemic influenza infection enhanced susceptibility to death during the 2009 H1N1 pandemic |
David Earn
|
mBio |
| Using genetic distance from archived samples for the prediction of antibiotic resistance in Escherichia coli |
David Fisman
|
Antimicrobial Agents and Chemotherapy |
| Novel Antibiotics May Be Noninferior but Are They Becoming Less Effective?: a Systematic Review |
Mark Loeb
|
Antimicrobial Agents and Chemotherapy |
| Comparison of antibiotics included in national essential medicines lists of 138 countries using the WHO Access, Watch, Reserve (AWaRe) classification: a cross-sectional study |
Mark Loeb
|
The Lancet Infectious Diseases |
| Draft genome sequence of azole-resistant aspergillus thermomutatus (neosartorya pseudofischeri) strain hmr-af-39, isolated from a human nasal septum abscess aspirate |
Sandrine Moreira
|
Microbiology Resource Announcements |
| Draft genome sequences of azole-resistant and azole-susceptible aspergillus turcosus clinical isolates recovered from bronchoalveolar lavage fluid samples |
Sandrine Moreira
|
Microbiology Resource Announcements |
| Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica |
Sandrine Moreira
|
Eukaryotic Cell |
| Characterization of Legionella species from watersheds in British Columbia, Canada |
Natalie Prystajecky
|
mSphere |
| Pooled nucleic acid amplification test for screening of stool specimens for shiga toxin-producing Escherichia coli |
Natalie Prystajecky
|
Journal of Clinical Microbiology |
| Resistance, resilience, and functional redundancy of freshwater bacterioplankton communities facing a gradient of agricultural stressors in a mesocosm experiment |
Jesse Shapiro
|
Molecular Ecology |
| Parasitism within mutualist guilds explains the maintenance of diversity in multi-species mutualisms |
Rebecca Tyson
|
Theoretical Ecology |
| Guest Editorial Explainable AI: Towards Fairness, Accountability, Transparency and Trust in Healthcare |
David Buckeridge
|
IEEE Journal of Biomedical and Health Informatics |
| Risk-stratified approach to breast cancer screening in canada: Women’s knowledge of the legislative context and concerns about discrimination from genetic and other predictive health data |
Michael Wolfson
|
Journal of Personalized Medicine |
| Increasing concentration of COVID-19 by socioeconomic determinants and geography in Toronto, Canada: an observational study |
Rafal Kustra,
Mathieu Maheu-Giroux,
Sharmistha Mishra,
Tyler Williamson
|
Annals of Epidemiology |
| A disproportionate epidemic: COVID-19 cases and deaths among essential workers in Toronto, Canada |
Rafal Kustra,
Sharmistha Mishra
|
Annals of Epidemiology |
| Widespread agrochemicals differentially affect zooplankton biomass and community structure |
Jesse Shapiro
|
Ecological Applications |
| Demystifying individual heterogeneity |
Troy Day
|
Ecology Letters |
| Identifying the environmental drivers of Campylobacter infection risk in southern Ontario, Canada using a One Health approachs |
David Fisman
|
Zoonoses and Public Health |
| Supernova Model Discrimination with Hyper-Kamiokande |
Dean Karlen,
Dean Karlen
|
Astrophysical Journal |
| Comorbidities and medical complications in hospitalized subarachnoid hemorrhage patients |
David Buckeridge
|
Canadian Journal of Neurological Sciences |
| The impact of lockdown timing on COVID-19 transmission across US counties |
Xuekui Zhang
|
eClinicalMedicine |
| Inferring population HIV incidence trends from surveillance data of recent HIV infection among HIV testing clients |
Mathieu Maheu-Giroux
|
AIDS (London, England) |
| The Canadian Health Clock and health calculators |
Doug Manuel
|
Canadian Journal of Public Health |
| Decision support for optimal use of joint training funds in the Canadian armed forces |
Matthew MacLeod
|
Research Anthology on Military and Defense Applications, Utilization, Education, and Ethic |
| Risk of COVID-19 variant importation – How useful are travel control measures? |
Julien Arino
|
Infectious Disease Modelling |
| Metagenomic study to evaluate functional capacity of a cyanobacterial bloom during oxidation |
Jesse Shapiro
|
Chemical Engineering Journal Advances |
| Learning and Animal Movement |
Mark Lewis
|
Frontiers in Ecology and Evolution |
| COVID-19 in schools: Mitigating classroom clusters in the context of variable transmission |
Caroline Colijn,
Paul Tupper
|
PLoS Computational Biology |
| Optimising nurse schedules at a community health centre |
Alexander Rutherford
|
Operations Research for Health Care |
| Optimal human papillomavirus vaccination strategies to prevent cervical cancer in low-income and middle-income countries in the context of limited resources: a mathematical modelling analysis |
Marc Brisson
|
The Lancet Infectious Diseases |
| Climate and outbreaks of the forest tent caterpillar |
Colin Daniel
|
Ecography |
| Retailer Compliance as a Predictor of Youth Smoking Participant and Consumption |
Alan Diener
|
Journal of School Health |
| Evolutionary potential for genomic islands of sexual divergence on recombining sex chromosomes |
Sarah Otto
|
New Phytologist |
| Associations of acetaminophen use during pregnancy and the first year of life with neurodevelopment in early childhood |
Diego Bassani
|
Paediatric and Perinatal Epidemiology |
| Virulence evolution and the trade-off hypothesis: History, current state of affairs and the future |
Amy Hurford
|
Journal of Evolutionary Biology |
| Risk Perception and Human Health Risk in Rural Communities Consuming Unregulated Well Water in Saskatchewan, Canada |
Javier Sanchez
|
Risk Analysis |
| STOCK MARKET OPENNESS AND MARKET QUALITY: EVIDENCE FROM THE SHANGHAI–HONG KONG STOCK CONNECT PROGRAM |
Xuekui Zhang
|
Journal of Financial Research |
| PICS: Probabilistic Inference for ChIP-seq |
Xuekui Zhang
|
Biometrics |
| I can see clearly now: Reinterpreting statistical significance |
Benjamin Bolker,
Jonathan Dushoff
|
Methods in Ecology and Evolution |
| Integrating continuous stocks and flows into state-and-transition simulation models of landscape change |
Colin Daniel
|
Methods in Ecology and Evolution |
| State-and-transition simulation models: a framework for forecasting landscape change |
Colin Daniel
|
Methods in Ecology and Evolution |
| Exploration of efficient reduced-order modeling and a posteriori error estimation |
Donald Estep
|
International Journal for Numerical Methods in Engineering |
| Predicting death in home care users: Derivation and validation of the Risk Evaluation for Support: Predictions for Elder-Life in the Community Tool (RESPECT) |
Doug Manuel
|
CMAJ |
| The burden of hand, foot, and mouth disease among children under different vaccination scenarios in China: a dynamic modelling study |
Sharmistha Mishra
|
BMC Infectious Diseases |
| Transformation of Diplonema papillatum, the type species of the highly diverse and abundant marine microeukaryotes Diplonemida (Euglenozoa) |
Sandrine Moreira
|
Environmental Microbiology |
| National contributions to global ecosystem values |
Sarah Otto
|
Conservation Biology |
| The evolution of realized niches within freshwater Synechococcus |
Jesse Shapiro
|
Environmental Microbiology |
| Reuniting ecology and evolution |
Jesse Shapiro
|
Environmental Microbiology Reports |
| Guided undersampling classification for automated radiation therapy quality assurance of prostate cancer treatment |
Dionne Aleman
|
Medical Physics |
| Dynamics, Persistence, and Genetic Management of the Endangered Florida Panther Population |
Benjamin Bolker
|
Wildlife Monographs |
| Using local ecological knowledge as evidence to guide management: A community-led harvest calculator for muskoxen in Greenland |
Colin Daniel
|
Conservation Science and Practice |
| Why is sterility virulence most common in sexually transmitted infections? Examining the role of epidemiology |
Troy Day
|
Evolution |
| The industrialization of farming may be driving virulence evolution |
Troy Day
|
Evolutionary Applications |
| Predictors of influenza a molecular viral shedding in Hutterite communities |
David Earn
|
Influenza and other Respiratory Viruses |
| Immune Evasion And The Evolution Of Molecular Mimicry In Parasites |
Amy Hurford
|
Evolution |
| Medical masks vs N95 respirators for preventing COVID-19 in healthcare workers: A systematic review and meta-analysis of randomized trials |
Mark Loeb
|
Influenza and other Respiratory Viruses |
| Bayesian statistical models to estimate EQ-5D utility scores from EORTC QLQ data in myeloma |
Christopher McCabe
|
Pharmaceutical Statistics |
| Unscrambling genetic information at the RNA level |
Sandrine Moreira
|
Wiley Interdisciplinary Reviews: RNA |
| Insights from Fisher's geometric model on the likelihood of speciation under different histories of environmental change |
Sarah Otto
|
Evolution |
| Relative genomic impacts of translocation history, hatchery practices, and farm selection in Pacific oyster Crassostrea gigas throughout the Northern Hemisphere |
Sarah Otto
|
Evolutionary Applications |
| Phonological regularity, perceptual biases, and the role of phonotactics in speech error analysis |
Paul Tupper
|
Wiley Interdisciplinary Reviews: Cognitive Science |
| Moving forward in circles: challenges and opportunities in modelling population cycles |
Rebecca Tyson
|
Ecology Letters |
| Modelling the combined impact of interventions in averting deaths during a synthetic-opioid overdose epidemic |
Daniel Coombs
|
Addiction |
| Somatic mutations substantially increase the per-generation mutation rate in the conifer Picea sitchensis |
Sarah Otto
|
Evolution Letters |
| Statistical modeling of patterns in annual reproductive rates |
Benjamin Bolker
|
Ecology |
| The impact of providing personalized depression risk information on self-help and help-seeking behaviors: Results from a mixed methods randomized controlled trial |
Doug Manuel
|
Depression and Anxiety |
| Addressing inequities in care on the path to eliminating hepatitis C in BC |
Naveed Janjua
|
British Columbia Medical Journal |
| Estimating the epidemic consequences of HIV prevention gaps among key populations |
Sharmistha Mishra
|
Journal of the International AIDS Society |
| Physical comorbidities increase the risk of psychiatric comorbidity in multiple sclerosis |
Larry Svenson
|
Brain and Behavior |
| A Call for Caution in Use of Pertussis Vaccine Effectiveness Studies to Estimate Waning Immunity: A Canadian Immunization Research Network Study |
Larry Svenson
|
Clinical Infectious Diseases |
| Effects of Reductions in Body Mass Index on the Future Osteoarthritis Burden in Canada: A Population-Based Microsimulation Study |
Michael Wolfson
|
Arthritis Care and Research |
| Health care contingent valuation studies: A review and classification of the literature |
Alan Diener
|
Health Economics |
| Understanding Rabies Persistence in Low-Density Fox Populations |
Amy Hurford
|
Ecoscience |
| Can hepatitis C elimination targets be sustained among people who inject drugs post-2030? |
Mathieu Maheu-Giroux
|
International Journal of Drug Policy |
| Patient perspectives on the implementation of routinised syphilis screening with HIV viral load testing: Qualitative process evaluation of the Enhanced Syphilis Screening Among HIV-positive Men trial |
Sharmistha Mishra
|
BMC Health Services Research |
| Recommendations of the 5th Canadian Consensus Conference on the diagnosis and treatment of dementia |
Jean-Paul Soucy
|
Alzheimer's and Dementia |
| Fluence map optimization in intensity-modulated radiation therapy treatment planning |
Dionne Aleman
|
Decision Analytics and Optimization in Disease Prevention and Treatment |
| A Model for the Spread of Tuberculosis with Drug-Sensitive and Emerging Multidrug-Resistant and Extensively Drug-Resistant Strains |
Julien Arino
|
Mathematical and Computational Modeling: With Applications in Natural and Social Sciences, Engineering, and the Arts |
| Using Mathematical Modeling to Integrate Disease Surveillance and Global Air Transportation Data |
Julien Arino
|
Analyzing and Modeling Spatial and Temporal Dynamics of Infectious Diseases |
| Chemsex practices and pre-exposure prophylaxis (PrEP) trajectories among individuals consulting for PrEP at a large sexual health clinic in Montréal, Canada (2013-2020) |
Mathieu Maheu-Giroux
|
Drug and Alcohol Dependence |
| The impact of varicella vaccination on paediatric herpes zoster epidemiology: a Canadian population-based retrospective cohort study |
Larry Svenson
|
European Journal of Clinical Microbiology and Infectious Diseases |
| Impact of direct-acting antivirals for HCV on mortality in a large population-based cohort study |
Naveed Janjua
|
Journal of Hepatology |
| Implementing opt-out hepatitis C virus (HCV) screening in Canadian provincial prisons: A model-based cost-effectiveness analysis |
Mathieu Maheu-Giroux
|
International Journal of Drug Policy |
| Development and validation of a predictive algorithm for risk of dementia in the community setting |
Doug Manuel
|
Journal of Epidemiology and Community Health |
| Price discounting as a hidden risk factor of energy drink consumption |
David Buckeridge
|
Canadian Journal of Public Health |
| cchsflow: an open science approach to transform and combine population health surveys |
Doug Manuel
|
Canadian Journal of Public Health |
| COVID-19 infection among international travellers: A prospective analysis |
Larry Svenson
|
BMJ Open |
| Corrigendum to “Quantitative meta-analysis of maternal prenatal salivary cortisol and newborn birthweight does not identify effect of fetal sex” [Psychoneuroendocrinology 106 (2019) 117–121](S0306453019301295)(10.1016/j.psyneuen.2019.03.036) |
Tyler Williamson
|
Psychoneuroendocrinology |
| The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic |
Julien Arino,
Caroline Colijn,
Jonathan Dushoff,
David Earn,
Michael Li,
Sarah Otto
|
Current Biology |
| Involuntary isolation: Interpreting mental health legislation during the COVID-19 pandemic |
David Fisman
|
British Journal of Psychiatry |
| SARS-CoV-2 variants and considerations of inferring causality on disease severity |
Sharmistha Mishra
|
The Lancet Infectious Diseases |
| Global seroprevalence of SARS-CoV-2 antibodies: A systematic review and metaanalysis |
Tyler Williamson
|
PLoS ONE |
| short communication: Sensitivity analysis of an integrated climate-economic model |
Benjamin Bolker
|
SIAM Journal on Financial Mathematics |
| Examining the dynamics of Epstein-Barr virus shedding in the tonsils and the impact of HIV-1 coinfection on daily saliva viral loads |
Daniel Coombs
|
PLoS Computational Biology |
| Smart about medications (SAM): A digital solution to enhance medication management following hospital discharge |
David Buckeridge
|
JAMIA Open |
| A Net Benefit Approach for the Optimal Allocation of a COVID-19 Vaccine |
Kate Harback,
Christopher McCabe,
Jeff Round
|
PharmacoEconomics |
| Modelling the impact of travel restrictions on COVID-19 cases in Newfoundland and Labrador |
Amy Hurford
|
Royal Society Open Science |
| High-resolution human mobility data reveal race and wealth disparities in disaster evacuation patterns |
Sean Cornelius
|
Humanities and Social Sciences Communications |
| Comparing Blanket vs. Selective Dry Cow Treatment Approaches for Elimination and Prevention of Intramammary Infections During the Dry Period: A Systematic Review and Meta-Analysis |
Javier Sanchez
|
Frontiers in Veterinary Science |
| The mobility gap: Estimating mobility thresholds required to control SARS-CoV-2 in Canada |
Shelby Sturrock
|
CMAJ |
| The uneven impacts of avoiding public transit on riders’ access to healthcare during COVID-19 |
Shelby Sturrock
|
Journal of Transport and Health |
| COVID-19 treatment combinations and associations with mortality in a large multi-site healthcare system |
Michael WZ Li
|
PLoS ONE |
| Social Proprioception: Measurement, Data, and Information from a Population Health Perspective |
Michael Wolfson
|
Why are some People Healthy and Others Not?: The Determinants of Health of Populations |
| Impact of HCV infection and ethnicity on incident type 2 diabetes: Findings from a large population-based cohort in British Columbia |
Naveed Janjua
|
BMJ Open Diabetes Research and Care |
| A single dose of the SARS-CoV-2 vaccine BNT162b2 elicits Fc-mediated antibody effector functions and T cell responses |
Sandrine Moreira
|
Cell Host and Microbe |
| Personalized risk assessment for prevention and early detection of breast cancer: Integration and implementation (PERSPECTIVE I&I) |
Michael Wolfson
|
Journal of Personalized Medicine |
| Diagnostic testing patterns for Streptococcus equi subsp. Equi in Ontario horses during the years 2008 to 2018 |
Amy Greer
|
Canadian Veterinary Journal |
| Human papillomavirus (HPV) vaccine uptake among a community-recruited sample of gay, bisexual, and other men who have sex with men in the three largest cities in Canada from 2017 to 2019 |
Marc Brisson
|
Vaccine |
| Under-Reporting of Known HIV-Positive Status Among People Living with HIV: A Systematic Review and Meta-analysis |
Mathieu Maheu-Giroux
|
AIDS and Behavior |
| Outbreak investigation of SARS-CoV-2 transmission in an emergency childcare centre |
Sandrine Moreira,
Jesse Shapiro
|
Canadian Journal of Public Health |
| A taxonomy of risk-associated alternative health practices: A Delphi study |
Timothy Caulfield
|
Health and Social Care in the Community |
| Transient disease dynamics across ecological scales |
David Earn
|
Theoretical Ecology |
| ISSCR Guidelines for Stem Cell Research and Clinical Translation: The 2021 update |
Jeff Round
|
Stem Cell Reports |
| Self-help behaviors partially mediate the relationship between personalized depression risk disclosure and psychological distress: A mediation analysis using data from a randomized controlled trial |
Doug Manuel
|
Journal of Psychiatric Research |
| Evolution of plasticity in production and transgenerational inheritance of small RNAs under dynamic environmental conditions |
Sarah Otto
|
PLoS Genetics |
| The effect of average temperature on suicide rates in five urban California counties, 1999–2019: an ecological time series analysis |
David Fisman
|
BMC Public Health |
| Costs and Scale-Up Costs of Integrating HIV Self-Testing Into Civil Society Organisation-Led Programmes for Key Populations in Côte d'Ivoire, Senegal, and Mali |
Mathieu Maheu-Giroux
|
Frontiers in Public Health |
| Use of HIV pre-exposure prophylaxis among urban Canadian gay, bisexual and other men who have sex with men: a cross-sectional analysis of the Engage cohort study |
Mathieu Maheu-Giroux
|
CMAJ open |
| Correction to: A novel preference-informed complementary trial (PICT) design for clinical trial research influenced by strong patient preferences (Trials, (2021), 22, 1, (206), 10.1186/s13063-021-05164-1) |
Christopher McCabe
|
Trials |
| Challenges of HIV Self-Test Distribution for Index Testing When HIV Status Disclosure Is Low: Preliminary Results of a Qualitative Study in Bamako (Mali) as Part of the ATLAS Project |
Mathieu Maheu-Giroux
|
Frontiers in Public Health |
| Applied stretch initiates directional invasion through the action of Rap1 GTPase as a tension sensor |
Daniel Coombs
|
Journal of Cell Science |
| In vivo regulation of integrin turnover by outside-in activation |
Daniel Coombs
|
Journal of Cell Science |
| Places of death and places of care for Indigenous Peoples in Ontario: a retrospective cohort study |
Doug Manuel
|
Canadian Journal of Public Health |
| Tools for measuring gender equality and women’s empowerment (GEWE) indicators in humanitarian settings |
Diego Bassani
|
Conflict and Health |
| Canadian rheumatology association recommendation for the use of COVID-19 vaccination for patients with autoimmune rheumatic diseases |
Mark Loeb
|
Journal of Rheumatology |
| Recurrent Traumatic Brain Injury Surveillance Using Administrative Health Data: A Bayesian Latent Class Analysis |
David Buckeridge
|
Frontiers in Neurology |
| Modeling COVID-19 and Its Impacts on U.S. Immigration and Customs Enforcement (ICE) Detention Facilities, 2020 |
Daniel Coombs
|
Journal of Urban Health |
| Progressive multifocal leukoencephalopathy and Creutzfeldt-Jakob disease: population-wide incidences, comorbidities, costs of care, and outcomes |
Larry Svenson
|
Journal of NeuroVirology |
| A robust and efficient algorithm to find profile likelihood confidence intervals |
Mark Lewis
|
Statistics and Computing |
| Genetic paths to evolutionary rescue and the distribution of fitness effects along them |
Sarah Otto
|
Genetics |
| Direct health system costs for systemic lupus erythematosus patients in Alberta, Canada |
Larry Svenson
|
PLoS ONE |
| Modeling of Future COVID-19 Cases, Hospitalizations, and Deaths, by Vaccination Rates and Nonpharmaceutical Intervention Scenarios — United States, April–September 2021 |
Dean Karlen,
Dean Karlen
|
MMWR Recommendations and Reports |
| The association of estimated cardiorespiratory fitness with COVID-19 incidence and mortality: A cohort study |
Shelby Sturrock
|
PLoS ONE |
| The Signature of Endemic Populations in the Spread of Mountain Pine Beetle Outbreaks |
Mark Lewis
|
Bulletin of Mathematical Biology |
| Estimating Genetic Similarity Matrices Using Phylogenies |
Caroline Colijn
|
Journal of Computational Biology |
| Modelling the impact of household size distribution on the transmission dynamics of COVID-19 |
Caroline Colijn
|
Journal of the Royal Society Interface |
| A posteriori error analysis for Schwarz overlapping domain decomposition methods |
Donald Estep
|
BIT Numerical Mathematics |
| Individual and social determinants of sars-cov-2 testing and positivity in ontario, canada: A population-wide study |
Rafal Kustra,
Sharmistha Mishra
|
CMAJ |
| Socio-demographic disparities in knowledge, practices, and ability to comply with COVID-19 public health measures in Canada |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Canadian Journal of Public Health |
| Validating viral hepatitis B and C diagnosis codes: a retrospective analysis using Ontario’s health administrative data |
Rafal Kustra
|
Canadian Journal of Public Health |
| Prophylaxis against covid-19: Living systematic review and network meta-analysis |
Mark Loeb
|
The BMJ |
| Peddling promise? An analysis of private umbilical cord blood banking company websites in Canada |
Timothy Caulfield
|
Cell and Tissue Banking |
| Epidemiological and evolutionary considerations of SARS-CoV-2 vaccine dosing regimes |
Caroline Wagner
|
Science |
| Yellow fever virus outbreak in Brazil under current and future climate |
Amy Greer
|
Infectious Disease Modelling |
| Measurements of and + charged-current cross-sections without detected pions or protons on water and hydrocarbon at a mean anti-neutrino energy of 0.86 GeV |
Dean Karlen,
Dean Karlen
|
Progress of Theoretical and Experimental Physics |
| The impact of age demographics on interpreting and applying population-wide infection fatality rates for COVID-19 |
Matthew MacLeod
|
Interfaces |
| Implementing Implementation Research: Teaching Implementation Research to HIV Researchers |
Sharmistha Mishra
|
Current HIV/AIDS Reports |
| Intention-to-treat analysis may be more conservative than per protocol analysis in antibiotic non-inferiority trials: a systematic review |
Mark Loeb
|
BMC Medical Research Methodology |
| Disseminated cryptococcal infection in a patient with a remote renal transplant |
Sharmistha Mishra
|
CMAJ |
| A multisite study of pertussis vaccine effectiveness by time since last vaccine dose from three Canadian provinces: A Canadian Immunization Research Network study |
Larry Svenson
|
Vaccine |
| Heterogeneity in transmissibility and shedding SARS-CoV-2 via droplets and aerosols |
David Fisman
|
eLife |
| Ten scientific reasons in support of airborne transmission of SARS-CoV-2 |
David Fisman
|
The Lancet |
| Has public health messaging during the COVID-19 pandemic reflected local risks to health?: A content analysis of tweeting practices across Canadian geographies |
Shelby Sturrock
|
Health and Place |
| Cohort profile: Development and characteristics of a retrospective cohort of individuals dispensed prescription opioids for non-cancer pain in British Columbia, Canada |
Naveed Janjua
|
BMJ Open |
| Age-dependence of healthcare interventions for COVID-19 in Ontario, Canada |
Benjamin Bolker,
Jonathan Dushoff
|
BMC Public Health |
| The virus evolves: Four public health priorities for reducing the evolutionary potential of SARS-CoV-2 |
Sarah Otto
|
BioScience |
| Software benchmark—classification tree algorithms for cell atlases annotation using single-cell rna-sequencing data |
Xuekui Zhang
|
Microbiology Research |
| The mobility gap: Estimating mobility thresholds required to control SARS-CoV-2 in Canada |
Shelby Sturrock
|
CMAJ |
| Adjoint sensitivity analysis for uncertain material parameters in frequency-domain 3-d fem |
Donald Estep
|
IEEE Transactions on Antennas and Propagation |
| Personalizing Breast Cancer Screening Based on Polygenic Risk and Family History |
Michael Wolfson
|
Journal of the National Cancer Institute |
| Joint testing of IgM and IgG has high value for ruling in SARS-CoV-2 infection |
Mark Loeb
|
Annals of Internal Medicine |
| A qualitative model of the HIV care continuum in Vancouver, Canada |
Alexander Rutherford
|
Health Systems |
| The contrasting role of nasopharyngeal angiotensin converting enzyme 2 (ACE2) transcription in SARS-CoV-2 infection: A cross-sectional study of people tested for COVID-19 in British Columbia, Canada |
Natalie Prystajecky
|
EBioMedicine |
| Visit-to-visit blood pressure variability is common in primary care patients: Retrospective cohort study of 221,803 adults |
Tyler Williamson
|
PLoS ONE |
| Elevated rates of horizontal gene transfer in the industrialized human microbiome |
Jesse Shapiro
|
Cell |
| Vitamin D supplementation to prevent acute respiratory infections: a systematic review and meta-analysis of aggregate data from randomised controlled trials |
Mark Loeb
|
The Lancet Diabetes and Endocrinology |
| Simulation-Based Estimation of SARS-CoV-2 Infections Associated with School Closures and Community-Based Nonpharmaceutical Interventions in Ontario, Canada |
Sharmistha Mishra
|
JAMA Network Open |
| Translational activity is uncoupled from nucleic acid content in bacterial cells of the human gut microbiota |
Jesse Shapiro
|
Gut Microbes |
| Maternal perinatal depression and infant sleep problems at 1 year of age: Subjective and actigraphy data from a population-based birth cohort study |
Diego Bassani
|
Journal of Sleep Research |
| Let’s do better: public representations of COVID-19 science |
Timothy Caulfield
|
Facets |
| The effect of seasonal respiratory virus transmission on syndromic surveillance for COVID-19 in Ontario, Canada |
David Fisman,
Ashleigh Tuite
|
The Lancet Infectious Diseases |
| Evaluating the Integration of One Health in Surveillance Systems for Antimicrobial Use and Resistance: A Conceptual Framework |
David Buckeridge
|
Frontiers in Veterinary Science |
| Speed and strength of an epidemic intervention |
Jonathan Dushoff
|
Proceedings of the Royal Society B: Biological Sciences |
| Differences in risk factors for hepatitis B, hepatitis C, and human immunodeficiency virus infection by ethnicity: A large population-based cohort study in British Columbia, Canada |
Naveed Janjua
|
International Journal of Infectious Diseases |
| Aging and interferons: Impacts on inflammation and viral disease outcomes |
Mark Loeb
|
Cells |
| Hospital costs of Canadian cystic fibrosis patients |
Tyler Williamson
|
Canadian Journal of Respiratory, Critical Care, and Sleep Medicine |
| Recommendation mapping of the World Health Organization's guidelines on tuberculosis: A new approach to digitizing and presenting recommendations |
Mark Loeb
|
Journal of Clinical Epidemiology |
| How much leeway is there to relax COVID-19 control measures? |
Caroline Colijn,
Daniel Coombs,
Naveed Janjua
|
Epidemics |
| Compelled Disclosure of Confidential Information in Patient Safety Research |
Timothy Caulfield
|
Journal of patient safety |
| Decentralizing PrEP delivery: Implementation and dissemination strategies to increase PrEP uptake among MSM in Toronto, Canada |
Sharmistha Mishra
|
PLoS ONE |
| Strengthening the culture of public health surveillance and population health monitoring |
David Buckeridge
|
Revue Medicale Suisse |
| Staying Ahead of the Epidemiologic Curve: Evaluation of the British Columbia Asthma Prediction System (BCAPS) During the Unprecedented 2018 Wildfire Season |
David Buckeridge
|
Frontiers in Public Health |
| A novel preference-informed complementary trial (PICT) design for clinical trial research influenced by strong patient preferences |
Christopher McCabe,
Jeff Round
|
Trials |
| Selective Interference and the Evolution of Sex |
Sarah Otto
|
The Journal of heredity |
| A dynamic neural gradient model of two-item and intermediate transposition |
Paul Tupper
|
Neural Computation |
| Examining tweet content and engagement of canadian public health agencies and decision makers during COVID-19: Mixed methods analysis |
Shelby Sturrock
|
Journal of Medical Internet Research |
| Increased Surgical Capacity without Additional Resources: Generalized Operating Room Planning and Scheduling |
Dionne Aleman
|
Production and Operations Management |
| Bayesian latent multi-state modeling for nonequidistant longitudinal electronic health records |
David Buckeridge
|
Biometrics |
| Importance of COVID-19 vaccine efficacy in older age groups |
Caroline Colijn,
Daniel Coombs
|
Vaccine |
| Short-Course Antimicrobial Therapy for Pediatric Community-Acquired Pneumonia: The SAFER Randomized Clinical Trial |
Mark Loeb
|
JAMA Pediatrics |
| Within-host model of respiratory virus shedding and antibody response to H9N2 avian influenza virus vaccination and infection in chickens |
Amy Greer
|
Infectious Disease Modelling |
| Effect of Correcting the Postnatal Age of Preterm-Born Children on Measures of Associations between Infant Length-for-Age z Scores and Mid-Childhood Outcomes |
Diego Bassani
|
American Journal of Epidemiology |
| Comparison of approaches to quantify SARS-CoV-2 in wastewater using RT-qPCR: Results and implications from a collaborative inter-laboratory study in Canada |
Natalie Prystajecky
|
Journal of Environmental Sciences (China) |
| Viral hepatitis C cascade of care: A population-level comparison of immigrant and long-term residents |
Naveed Janjua,
Rafal Kustra
|
Liver International |
| Assessing the Potential Impact of Disruptions Due to COVID-19 on HIV Among Key and Lower-Risk Populations in the Largest Cities of Cameroon and Benin |
Mathieu Maheu-Giroux,
Sharmistha Mishra
|
Journal of acquired immune deficiency syndromes (1999) |
| Trends in knowledge of HIV status and efficiency of HIV testing services in sub-Saharan Africa, 2000–20: a modelling study using survey and HIV testing programme data |
Mathieu Maheu-Giroux
|
The Lancet HIV |
| A commentary on the value of hospital data for covid-19 pandemic surveillance and planning |
Doug Manuel
|
International Journal of Population Data Science |
| Cohort profile: St. Michael's Hospital Tuberculosis Database (SMH-TB), a retrospective cohort of electronic health record data and variables extracted using natural language processing |
Sharmistha Mishra
|
PLoS ONE |
| The relationship between the global burden of influenza from 2017 to 2019 and COVID-19: Descriptive epidemiological assessment |
Sharmistha Mishra
|
JMIR Public Health and Surveillance |
| The impact of public coverage of newer hepatitis C medications on utilization, adherence, and costs in British Columbia |
Naveed Janjua
|
PLoS ONE |
| A novel development indicator based on population-average height trajectories of children aged 0-5 years modelled using 145 surveys in 64 countries, 2000-2018 |
Diego Bassani
|
BMJ Global Health |
| Parametric models for combined failure time data from an incident cohort study and a prevalent cohort study with follow-up |
David Buckeridge
|
International Journal of Biostatistics |
| The equity and effectiveness of achieving Canada’s voluntary sodium reduction guidance targets: A modelling study using the 2015 canadian community health survey—nutrition |
Doug Manuel
|
Nutrients |
| Constant Distortion Embeddings of Symmetric Diversities |
Paul Tupper
|
Analysis and Geometry in Metric Spaces |
| Population Level-Impact and Herd Effects Following the Introduction of Human Papillomavirus Vaccination Programmes: Updated Systematic Review and Meta-analysis |
Marc Brisson
|
Obstetrical and Gynecological Survey |
| Point-of-sale cigarette pricing strategies and young adult smokers' intention to purchase cigarettes: An online experiment |
Nathaniel Osgood
|
Tobacco Control |
| COVID-19 in Solid Organ Transplantation: Disease Severity and Clinical Update |
Michael WZ Li
|
Transplantation Proceedings |
| TRY plant trait database – enhanced coverage and open access |
Sarah Otto
|
Global Change Biology |
| The impact of porcine reproductive and respiratory syndrome virus (PRRSV) genotypes, established on the basis of ORF-5 nucleotide sequences, on three production parameters in Ontario sow farms |
Amy Greer
|
Preventive Veterinary Medicine |
| Aligning population models with data: Adaptive management for big game harvests |
Mark Lewis
|
Global Ecology and Conservation |
| The OncoSim model: Development and use for better decision-making in Canadian cancer control |
Michael Wolfson
|
Current Oncology |
| Implementing low-dose computed tomography screening for lung cancer in Canada: Implications of alternative at-risk populations, screening frequency, and duration |
Michael Wolfson
|
Current Oncology |
| Using the cancer risk management model to evaluate the health and economic impacts of cytology compared with human papillomavirus DNA testing for primary cervical cancer screening in Canada |
Michael Wolfson
|
Current Oncology |
| Using the cancer risk management model to evaluate colorectal cancer screening options for Canada |
Michael Wolfson
|
Current Oncology |
| Concurrent prescriptions for opioids and benzodiazepines and risk of opioid overdose: Protocol for a retrospective cohort study using linked administrative data |
David Buckeridge
|
BMJ Open |
| Crowdfunding Campaigns and COVID-19 Misinformation |
Timothy Caulfield
|
American journal of public health |
| Logic-Based Benders Decomposition and Binary Decision Diagram Based Approaches for Stochastic Distributed Operating Room Scheduling |
Dionne Aleman
|
INFORMS Journal on Computing |
| A conceptual guide to measuring species diversity |
Jonathan Dushoff
|
Oikos |
| Disseminated cryptococcal infection in a patient with a remote renal transplant |
Sharmistha Mishra
|
CMAJ |
| Posterior Segment Ophthalmic Manifestations in Ebola Survivors, Sierra Leone |
Sharmistha Mishra
|
Ophthalmology |
| Agent-Based Modeling: A Method for Investigating Challenging Research Problems |
Nathaniel Osgood
|
Nursing research |
| Mathematical modelling of the influence of serosorting on the population-level HIV transmission impact of pre-exposure prophylaxis |
Sharmistha Mishra
|
AIDS (London, England) |
| Predicting Vibrio cholerae Infection and Disease Severity Using Metagenomics in a Prospective Cohort Study |
Jesse Shapiro
|
Journal of Infectious Diseases |
| A data quality assessment to inform hypertension surveillance using primary care electronic medical record data from Alberta, Canada |
Tyler Williamson
|
BMC Public Health |
| Women’s views on multifactorial breast cancer risk assessment and risk-stratified screening: A population-based survey from four Provinces in Canada |
Michael Wolfson
|
Journal of Personalized Medicine |
| Modifying NICE’s Approach to Equity Weighting |
Christopher McCabe
|
PharmacoEconomics |
| Determinants of Influenza Mortality Trends: Age-Period-Cohort Analysis of Influenza Mortality in the United States, 1959–2016 |
David Earn
|
Demography |
| Surviving Sepsis Campaign Guidelines on the Management of Adults with Coronavirus Disease 2019 (COVID-19) in the ICU: First Update |
Mark Loeb
|
Critical Care Medicine |
| Estimating the health impact of vaccination against ten pathogens in 98 low-income and middle-income countries from 2000 to 2030: a modelling study |
Marc Brisson
|
The Lancet |
| Measures of Adiposity and Risk of Testing Positive for SARS-CoV-2 in the UK Biobank Study |
Shelby Sturrock
|
Journal of Obesity |
| Estimated Prevalence and Incidence of Disease-Associated Human Papillomavirus Types Among 15- to 59-Year-Olds in the United States |
Marc Brisson
|
Sexually transmitted diseases |
| The Estimated Direct Lifetime Medical Costs of Sexually Transmitted Infections Acquired in the United States in 2018 |
Marc Brisson
|
Sexually transmitted diseases |
| The Estimated Lifetime Medical Cost of Diseases Attributable to Human Papillomavirus Infections Acquired in 2018 |
Marc Brisson
|
Sexually transmitted diseases |
| Catching a resurgence: Increase in SARS-CoV-2 viral RNA identified in wastewater 48 h before COVID-19 clinical tests and 96 h before hospitalizations |
Doug Manuel
|
Science of the Total Environment |
| Describing, analysing and understanding the effects of the introduction of HIV self-testing in West Africa through the ATLAS programme in Côte d’Ivoire, Mali and Senegal |
Mathieu Maheu-Giroux
|
BMC Public Health |
| Managing aquatic invasions: Optimal locations and operating times for watercraft inspection stations |
Mark Lewis
|
Journal of Environmental Management |
| NICE’s Discounting Review: Clear Thinking on Rational Revision Meets Obstacle of Industrial Interests |
Christopher McCabe
|
PharmacoEconomics |
| Feedback between coevolution and epidemiology can help or hinder the maintenance of genetic variation in host-parasite models |
Sarah Otto
|
Evolution |
| Evaluation of an OPEN Stewardship generated feedback intervention to improve antibiotic prescribing among primary care veterinarians in Ontario, Canada and Israel: Protocol for evaluating usability and an interrupted time-series analysis |
David Fisman,
Amy Greer
|
BMJ Open |
| The optimal design of clinical trials with potential biomarker effects: A novel computational approach |
Xuekui Zhang
|
Statistics in Medicine |
| Heterogeneous Hunter-Gatherer and Steppe-Related Ancestries in Late Neolithic and Bell Beaker Genomes from Present-Day France |
Jesse Shapiro
|
Current Biology |
| Continued HPV vaccination in the face of unexpected challenges: A commentary on the rationale for an extended interval two-dose schedule |
Marc Brisson
|
Vaccine |
| Evaluation of an automated feedback intervention to improve antimicrobial prescribing among primary care physicians (OPEN Stewardship): protocol for an interrupted time-series and usability analysis in Ontario, Canada and Southern Israel |
David Fisman
|
BMJ open |
| Quality and Safety in Long-Term Care in Ontario: The Impact of Language Discordance |
Doug Manuel
|
Journal of the American Medical Directors Association |
| Working in a bubble: How can businesses reopen while limiting the risk of COVID-19 outbreaks? |
Troy Day,
David Fisman,
Tyler Williamson
|
CMAJ |
| Validating International Classification of Disease 10<sup>th</sup> Revision algorithms for identifying influenza and respiratory syncytial virus hospitalizations |
Rafal Kustra
|
PLoS ONE |
| Antibody and cell-mediated immune responses are correlates of protection against influenza infection in vaccinated older adults |
Mark Loeb
|
Vaccines |
| A systematic review and narrative synthesis of the use of environmental samples for the surveillance of avian influenza viruses in wild waterbirds |
Natalie Prystajecky
|
Journal of Wildlife Diseases |
| Nobody ever questions—Polypharmacy in care homes: A mixed methods evaluation of a multidisciplinary medicines optimisation initiative |
Jeff Round
|
PLoS ONE |
| Alternative dose allocation strategies to increase benefits from constrained COVID-19 vaccine supply |
David Fisman,
Ashleigh Tuite
|
Annals of Internal Medicine |
| Can Cyanobacterial Diversity in the Source Predict the Diversity in Sludge and the Risk of Toxin Release in a Drinking Water Treatment Plant? |
Jesse Shapiro
|
Toxins |
| Can Cyanobacterial Diversity in the Source Predict the Diversity in Sludge and the Risk of Toxin Release in a Drinking Water Treatment Plant? |
Jesse Shapiro
|
Toxins |
| Preface |
David Buckeridge
|
Studies in Computational Intelligence |
| Classification of porcine reproductive and respiratory syndrome virus in Ontario using Bayesian phylogenetics and assessment of temporal trends |
Amy Greer
|
Canadian Journal of Veterinary Research |
| Refined Upper Bounds on the Size of the Condensed Neighbourhood of Sequences |
Cedric Chauve
|
Proceedings of the Prague Stringology Conference 2021, PSC 2021 |
| A first-in-human phase i study of the oral p38 MAPK inhibitor, ralimetinib (LY2228820 Dimesylate), in patients with advanced cancer |
Xuekui Zhang
|
Clinical Cancer Research |
| On the Origin of Coexisting Species |
Sarah Otto
|
Trends in Ecology and Evolution |
| Patterns of smallpox mortality in London, England, over three centuries |
David Earn
|
PLoS Biology |
| Economic and Behavioral Influencers of Vaccination and Antimicrobial Use |
Caroline Wagner
|
Frontiers in Public Health |
| Temporal Associations between Community Incidence of COVID-19 and Nursing Home Outbreaks in Ontario, Canada |
Ashleigh Tuite
|
Journal of the American Medical Directors Association |
| Leveraging large-deviation statistics to decipher the stochastic properties of measured trajectories |
Caroline Wagner
|
New Journal of Physics |
| On logistic Box–Cox regression for flexibly estimating the shape and strength of exposure-disease relationships |
Xuekui Zhang
|
Canadian Journal of Statistics |
| Design of 18 nm Doxorubicin-Loaded 3-Helix Micelles: Cellular Uptake and Cytotoxicity in Patient-Derived GBM6 Cells |
Michael WZ Li
|
ACS Biomaterials Science and Engineering |
| Validation of a Clinical Prediction Rule to Predict Asymptomatic Chlamydia and Gonorrhea Infections among Internet-Based Testers |
Sharmistha Mishra
|
Sexually Transmitted Diseases |
| Coevolution fails to maintain genetic variation in a host–parasite model with constant finite population size |
Sarah Otto
|
Theoretical Population Biology |
| Characterizing Pain in Children with Acute Gastroenteritis Who Present for Emergency Care |
Larry Svenson
|
Journal of Pediatrics |
| The evolution of age-specific choosiness when mating |
Troy Day
|
Journal of Evolutionary Biology |
| Quarantine and the risk of COVID-19 importation |
Julien Arino
|
Epidemiology and Infection |
| From cervical cancer elimination to eradication of vaccine-type human papillomavirus: Feasibility, public health strategies and cost-effectiveness |
Marc Brisson
|
Preventive Medicine |
| Reliability of nonlocalizing signs and symptoms as indicators of the presence of infection in nursing-home residents |
Mark Loeb
|
Infection Control and Hospital Epidemiology |
| In-depth analysis of genetic variation associated with severe west nile viral disease |
Mark Loeb
|
Vaccines |
| The Prevalence of Campylobacter in Live Cattle, Turkey, Chicken, and Swine in the United States and Canada: A Systematic Review and Meta-Analysis |
Amy Greer
|
Foodborne Pathogens and Disease |
| Dépistage actif chez les groupes courant un risque accru de contracter le SRAS-CoV-2 au Canada : coûts et ressources humaines nécessaires |
Marc Brisson
|
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne |
| Façonner l'avenir de la pandémie de COVID-19 au Canada |
Amy Greer,
Ashleigh Tuite
|
CMAJ |
| Modeling the coronavirus disease 2019 pandemic: A comprehensive guide of infectious disease and decision-analytic models |
Sharmistha Mishra
|
Journal of Clinical Epidemiology |
| Quantifying the impact of COVID-19 control measures using a Bayesian model of physical distancing |
Caroline Colijn,
Daniel Coombs
|
PLoS Computational Biology |
| Effect of media-induced modification of travel rates on disease transmission in a multiple patch setting |
Julien Arino
|
Journal of Applied Analysis and Computation |
| Evaluating health literacy among adolescent and young adult pregnant women from a low-income area of northeast brazil |
Diego Bassani
|
International Journal of Environmental Research and Public Health |
| Estimating epidemic coupling between populations from the time to invasion: Estimating epidemic coupling between populations from the time to invasion |
David Earn
|
Journal of the Royal Society Interface |
| Trans-splicing and RNA editing of LSU rRNA in Diplonema mitochondria |
Sandrine Moreira
|
Nucleic Acids Research |
| Corrigendum: The Complex Relationship Between Veterinarian Mental Health and Client Satisfaction (Frontiers in Veterinary Science, (2020), 7, (92), 10.3389/fvets.2020.00092) |
Amy Greer
|
Frontiers in Veterinary Science |
| Quantifying the Evolving Contribution of HIV Interventions and Key Populations to the HIV Epidemic in Yaoundé, Cameroon |
Sharmistha Mishra
|
Journal of acquired immune deficiency syndromes (1999) |
| Open government data, uncertainty and coronavirus: An infodemiological case study |
Shelby Sturrock
|
Social Science and Medicine |
| Probabilistic One-Way Sensitivity Analysis with Multiple Comparators: The Conditional Net Benefit Frontier |
Christopher McCabe
|
PharmacoEconomics |
| Diversity Assessment of Toxic Cyanobacterial Blooms during Oxidation |
Jesse Shapiro
|
Toxins |
| Crowdfunding for complementary and alternative medicine: What are cancer patients seeking? |
Timothy Caulfield
|
PLoS ONE |
| Does diversity beget diversity in microbiomes? |
Jesse Shapiro
|
eLife |
| Smoking patterns based on birth-cohort-specific histories from 1965 to 2013, with projections to 2041 |
Doug Manuel
|
Health reports |
| What We Know Now: An Economic Evaluation of Chickenpox Vaccination and Dose Timing Using an Agent-Based Model |
Nathaniel Osgood
|
Value in Health |
| Relationships between type of hoof lesion and behavioral signs of lameness in Holstein cows housed in Canadian tiestall facilities |
Javier Sanchez
|
Journal of Dairy Science |
| Transmission analysis of a large tuberculosis outbreak in london: A mathematical modelling study using genomic data |
Caroline Colijn
|
Microbial Genomics |
| Adequacy of prenatal care in northeast Brazil: Pilot data comparing attainment of standard care criteria for first-time adolescent and adult pregnant women |
Diego Bassani
|
International Journal of Women's Health |
| Derivation and Validation of Clinical Prediction Rules for COVID-19 Mortality in Ontario, Canada |
David Fisman,
Amy Greer
|
Open Forum Infectious Diseases |
| Life expectancy and health-adjusted life expectancy in people with inflammatory bowel disease |
Doug Manuel
|
CMAJ |
| Tocilizumab in the Management of COVID-19: A Preliminary Report |
Michael WZ Li
|
American Journal of the Medical Sciences |
| Consequences of nest site selection vary along a tidal gradient |
Benjamin Bolker
|
Journal of Animal Ecology |
| Spread of Dutch elm disease in an urban forest |
Julien Arino
|
Ecological Modelling |
| Investigating the impact of the mycorrhizal inoculum on the resident fungal community and on plant growth |
Rebecca Tyson
|
Ecological Modelling |
| Characteristics of a population-based multiple sclerosis cohort treated with disease-modifying drugs in a universal healthcare setting |
Larry Svenson
|
Expert Review of Neurotherapeutics |
| Impact of climate and public health interventions on the COVID-19 pandemic: A prospective cohort study |
David Fisman
|
CMAJ |
| Ending COVID-19: progress and gaps in research—highlights of the July 2020 GloPID-R COVID-19 Research Synergies Meetings |
David Fisman
|
BMC Medicine |
| COVID-19 and immune boosting' on the internet: A content analysis of Google search results |
Timothy Caulfield
|
BMJ Open |
| Modelling airport catchment areas to anticipate the spread of infectious diseases across land and air travel |
Ashleigh Tuite
|
Spatial and Spatio-temporal Epidemiology |
| The role of case importation in explaining differences in early SARS-CoV-2 transmission dynamics in Canada—A mathematical modeling study of surveillance data |
Marc Brisson,
David Buckeridge
|
International Journal of Infectious Diseases |
| Cyclic epidemics and extreme outbreaks induced by hydro-climatic variability and memory: Cyclic epidemics and extreme outbreaks induced by hydro-climatic variability and memory |
Caroline Wagner
|
Journal of the Royal Society Interface |
| Mathematical modeling of COVID-19 transmission and mitigation strategies in the population of Ontario, Canada |
David Fisman,
Ashleigh Tuite
|
CMAJ |
| Discussing non-invasive prenatal testing on Reddit: The benefits, the concerns, and the comradery |
Timothy Caulfield
|
Prenatal Diagnosis |
| Congenital Anomalies of the Kidney and Urinary Tract (CAKUT): An Emerging Relationship With Pregestational Diabetes Mellitus Among First Nations and Non-First Nations People in Saskatchewan—Results From the DIP: ORRIIGENSS Project |
Nathaniel Osgood
|
Canadian Journal of Diabetes |
| Exploiting the full potential of Bayesian networks in predictive ecology |
Mark Lewis
|
Methods in Ecology and Evolution |
| Relationship of Patent Ductus Arteriosus Echocardiographic Markers With Descending Aorta Diastolic Flow |
Diego Bassani
|
Journal of Ultrasound in Medicine |
| Developments in asthma incidence and prevalence in Alberta between 1995 and 2015 |
Larry Svenson
|
Allergy, Asthma and Clinical Immunology |
| Heterogeneity in testing, diagnosis and outcome in SARS-CoV-2 infection across outbreak settings in the Greater Toronto Area, Canada: an observational study |
Rafal Kustra
|
CMAJ open |
| On measuring the inequity of financing health care in the United States and the redistribution of income through health care financing in Canada |
Michael Wolfson
|
American Journal of Public Health |
| Influenza Vaccination to Reduce Cardiovascular Morbidity and Mortality in Patients With COVID-19: JACC State-of-the-Art Review |
Mark Loeb
|
Journal of the American College of Cardiology |
| Effects of 21st-century climate, land use, and disturbances on ecosystem carbon balance in California |
Colin Daniel
|
Global Change Biology |
| Web and phone-based COVID-19 syndromic surveillance in Canada: A cross-sectional study |
David Fisman,
Ashleigh Tuite
|
PLoS ONE |
| Prospective, randomised clinical trial of four different presurgical hand antiseptic techniques in equine surgery |
Javier Sanchez
|
Equine Veterinary Journal |
| Crowdfunding cannabidiol (CBD) for cancer: Hype and misinformation on gofundme |
Timothy Caulfield
|
American Journal of Public Health |
| Eco-evolutionary dynamics of range expansion |
Mark Lewis
|
Ecology |
| Working in a bubble: How can businesses reopen while limiting the risk of COVID-19 outbreaks? |
Troy Day,
David Fisman
|
CMAJ |
| A unifying theory for two-dimensional spatial redistribution kernels with applications in population spread modelling: A unifying theory for two-dimensional spatial redistribution kernels with applications in population spread modelling |
Mark Lewis
|
Journal of the Royal Society Interface |
| Migratory hosts can maintain the high-dose/refuge effect in a structured host-parasite system: The case of sea lice and salmon |
Mark Lewis
|
Evolutionary Applications |
| Knowledge-based isocenter selection in radiosurgery planning |
Dionne Aleman
|
Medical Physics |
| How to measure the impacts of antibiotic resistance and antibiotic development on empiric therapy: New composite indices |
Amy Hurford
|
BMJ Open |
| Drug treatments for covid-19: Living systematic review and network meta-Analysis |
Mark Loeb
|
The BMJ |
| Safe management of bodies of deceased persons with suspected or confirmed COVID-19: A rapid systematic review |
Mark Loeb
|
BMJ Global Health |
| Trends in hepatitis C virus seroprevalence and associated risk factors among men who have sex with men in Montréal: Results from three cross-sectional studies (2005, 2009, 2018) |
Mathieu Maheu-Giroux
|
Sexually Transmitted Infections |
| Testing the socioeconomic and environmental determinants of better child-health outcomes in Africa: A cross-sectional study among nations |
Sarah Otto
|
BMJ Open |
| Protocol for a feasibility randomised trial of low-intensity interventions for antenatal depression: ADAGIO trial comparing interpersonal counselling with cognitive behavioural therapy |
Jeff Round
|
BMJ Open |
| Clinical and cost-effectiveness of the Ross procedure versus conventional aortic valve replacement in young adults |
Jeff Round
|
Open Heart |
| Mirtazapine added to SSRIs or SNRIs for treatment resistant depression in primary care: Phase III randomised placebo controlled trial (MIR) |
Jeff Round
|
BMJ (Online) |
| Nurse-led medicines' monitoring in care homes study protocol: A process evaluation of the impact and sustainability of the adverse drug reaction (ADRe) profile for mental health medicines |
Jeff Round
|
BMJ Open |
| Exploring the relationship between frequent internet use and health and social care resource use in a community-based cohort of older adults: An observational study in primary care |
Jeff Round
|
BMJ Open |
| A cohort study of regional migration and the risks of attempted suicide and violent assault injury |
Larry Svenson
|
Injury Prevention |
| Genetic susceptibility to beryllium: A case-referent study of men and women of working age with sarcoidosis or other chronic lung disease |
Larry Svenson
|
Occupational and Environmental Medicine |
| Measurement of coverage, compliance and determinants of uptake in a publicly funded rotavirus vaccination programme: A retrospective cohort study |
Larry Svenson
|
BMJ Open |
| Using population-wide administrative and laboratory data to estimate type- A nd subtype-specific influenza vaccine effectiveness: A surveillance protocol |
Larry Svenson
|
BMJ Open |
| Behavioural characteristics and abdominal obesity among Brazilian shift working women |
Diego Bassani
|
Public Health Nutrition |
| Linear growth and mid-childhood cognitive outcomes in three birth cohorts of term-born children: An approach to integrating three growth models to explore critical windows |
Diego Bassani
|
BMJ Open |
| Palivizumab's real-world effectiveness: A population-based study in Ontario, Canada, 1993-2017 |
David Fisman
|
Archives of Disease in Childhood |
| Age-stratified burden of pneumococcal community acquired pneumonia in hospitalised Canadian adults from 2010 to 2015 |
Mark Loeb
|
BMJ Open Respiratory Research |
| Study protocol for two complementary trials of non-steroidal or opioid analgesia use for children aged 6 to 17 years with musculoskeletal injuries (the No OUCH study) |
Christopher McCabe
|
BMJ Open |
| 'Turning the tide' on hyperglycemia in pregnancy: insights from multiscale dynamic simulation modeling |
Nathaniel Osgood
|
BMJ open diabetes research & care |
| Exploring how epidemic context influences syphilis screening impact: A mathematical modeling study |
Ashleigh Tuite
|
Sexually Transmitted Diseases |
| Liver Injury in Liver Transplant Recipients With Coronavirus Disease 2019 (COVID-19): U.S. Multicenter Experience |
Michael WZ Li
|
Hepatology |
| When to be temperate: On the fitness benefits of lysis vs. Lysogeny |
Jonathan Dushoff
|
Virus Evolution |
| Clinical impact and cost-effectiveness of integrating smoking cessation into lung cancer screening: a microsimulation model |
Michael Wolfson
|
CMAJ open |
| Designing sub-20 nm self-assembled nanocarriers for small molecule delivery: Interplay among structural geometry, assembly energetics, and cargo release kinetics |
Michael WZ Li
|
Journal of Controlled Release |
| Fast estimation of time-varying infectious disease transmission rates |
David Earn
|
PLoS Computational Biology |
| Anthropometric data quality assessment in multisurvey studies of child growth |
Diego Bassani
|
American Journal of Clinical Nutrition |
| Global evidence of gender inequity in academic health research: A living scoping review protocol |
Christopher McCabe
|
JBI Evidence Synthesis |
| Active testing of groups at increased risk of acquiring SARS-CoV-2 in Canada: Costs and human resource needs |
Marc Brisson
|
CMAJ |
| Carbapenemase-producing Enterobacterales in hospital drains in Southern Ontario, Canada |
David Fisman
|
Journal of Hospital Infection |
| "immune Boosting" in the time of COVID: Selling immunity on Instagram |
Timothy Caulfield
|
Allergy, Asthma and Clinical Immunology |
| Non-steroidal or opioid analgesia use for children with musculoskeletal injuries (the No OUCH study): Statistical analysis plan |
Christopher McCabe,
Jeff Round
|
Trials |
| Computational approaches to support comparative analysis of multiparametric tests: Modelling versus Training |
Christopher McCabe
|
PLoS ONE |
| Six versus 12 months’ adjuvant trastuzumab in patients with HER2-positive early breast cancer: The PERSEPHONE non-inferiority RCT |
Christopher McCabe
|
Health Technology Assessment |
| Restoring trust: COVID-19 and the future of long-term care in Canada |
Michael Wolfson
|
Facets |
| Effect of an integrated neonatal care kit on cause-specific neonatal mortality in rural Pakistan |
Diego Bassani
|
Global Health Action |
| A graph-theoretic barcode ordering model for linked-reads |
Cedric Chauve
|
Leibniz International Proceedings in Informatics, LIPIcs |
| Nongenetic inheritance and multigenerational plasticity in the Nematode C. Elegans |
Troy Day
|
eLife |
| A pragmatic randomized controlled trial of multi-dose oral ondansetron for pediatric gastroenteritis (the DOSE-AGE study): Statistical analysis plan |
Christopher McCabe
|
Trials |
| Assessing oligonucleotide designs from early lab developed PCR diagnostic tests for SARS-CoV-2 using the PCR_strainer pipeline |
Natalie Prystajecky
|
Journal of Clinical Virology |
| Genetics and Age-Related Eye Disease Study Formulation Interaction in Neovascular Age-Related Macular Degeneration |
Rafal Kustra
|
Journal of VitreoRetinal Diseases |
| Poisson integral type quarantine in a stochastic SIR system |
Troy Day
|
Mathematical Biosciences and Engineering |
| Adjoint-Based Accelerated Adaptive Refinement in Frequency Domain 3-D Finite Element Method Scattering Problems |
Donald Estep
|
IEEE Transactions on Antennas and Propagation |
| Potential role of social distancing in mitigating spread of coronavirus disease, South Korea |
Jonathan Dushoff
|
Emerging Infectious Diseases |
| Shaping the future of the COVID-19 pandemic in Canada |
Ashleigh Tuite
|
CMAJ |
| Clinical Course and Molecular Viral Shedding among Asymptomatic and Symptomatic Patients with SARS-CoV-2 Infection in a Community Treatment Center in the Republic of Korea |
Mark Loeb
|
JAMA Internal Medicine |
| A survey of management practices that influence calf welfare and an estimation of the annual calf mortality risk in pastured dairy herds in Uruguay |
Javier Sanchez
|
Journal of Dairy Science |
| The consumer representation of DNA ancestry testing on YouTube |
Timothy Caulfield
|
New Genetics and Society |
| SeroTracker: a global SARS-CoV-2 seroprevalence dashboard |
David Buckeridge,
Tyler Williamson
|
The Lancet Infectious Diseases |
| Review of high dose vancomycin in the treatment of Clostridioides difficile infection |
Mark Loeb
|
Infectious Diseases |
| Use of facemasks during the COVID-19 pandemic |
Mark Loeb
|
The Lancet Respiratory Medicine |
| Genomic variant-identification methods may alter mycobacterium tuberculosis transmission inferences |
Caroline Colijn
|
Microbial Genomics |
| Age is just a number: A critically important number for covid-19 case fatality |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Annals of Internal Medicine |
| HASLR: Fast Hybrid Assembly of Long Reads |
Cedric Chauve
|
iScience |
| Epidemiology of varicella among immigrants and non-immigrants in Quebec, Canada, before and after the introduction of childhood varicella vaccination: a retrospective cohort study |
Marc Brisson
|
The Lancet Infectious Diseases |
| Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
Journal of the Royal Society Interface |
| First measurement of the charged current νμ double differential cross section on a water target without pions in the final state |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Instability of Suicidal Ideation in Patients Hospitalized for Depression: An Exploratory Study Using Smartphone Ecological Momentary Assessment |
Nathaniel Osgood
|
Archives of Suicide Research |
| Quantifying the annual incidence and underestimation of seasonal influenza: A modelling approach |
Julien Arino
|
Theoretical Biology and Medical Modelling |
| The potential of smartphone apps in informing protobacco and antitobacco messaging efforts among underserved communities: Longitudinal observational study |
Nathaniel Osgood
|
Journal of Medical Internet Research |
| Expenditures on childbirth care: A comparison of the 2004 and 2015 birth cohorts in Pelotas, Rio Grande do Sul State, Brazil |
Diego Bassani
|
Cadernos de Saude Publica |
| The law and problematic marketing by private umbilical cord blood banks |
Timothy Caulfield
|
BMC Medical Ethics |
| Surviving Sepsis Campaign: Guidelines on the Management of Critically Ill Adults with Coronavirus Disease 2019 (COVID-19) |
Mark Loeb
|
Critical Care Medicine |
| Inferring generation-interval distributions from contact-tracing data |
Jonathan Dushoff
|
Journal of the Royal Society Interface |
| Evidence for transmission of covid-19 prior to symptom onset |
Caroline Colijn
|
eLife |
| Relative Model Fit Does Not Predict Topological Accuracy in Single-Gene Protein Phylogenetics |
Jesse Shapiro
|
Molecular Biology and Evolution |
| Simultaneous measurement of the muon neutrino charged-current cross section on oxygen and carbon without pions in the final state at T2K |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| On the evolutionary epidemiology of SARS-CoV-2 |
Troy Day,
Sarah Otto
|
Current Biology |
| Climatological, virological and sociological drivers of current and projected dengue fever outbreak dynamics in Sri Lanka |
Caroline Wagner
|
Journal of the Royal Society Interface |
| First combined measurement of the muon neutrino and antineutrino charged-current cross section without pions in the final state at T2K |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Physical distancing, face masks, and eye protection to prevent person-to-person transmission of SARS-CoV-2 and COVID-19: a systematic review and meta-analysis |
Mark Loeb
|
The Lancet |
| Extraction and Detection of Avian Influenza Virus From Wetland Sediment Using Enrichment-Based Targeted Resequencing |
Natalie Prystajecky
|
Frontiers in Veterinary Science |
| C'est vraiment compliqué: A case study on the delivery of maternal and child health and nutrition interventions in the conflict-affected regions of Mali |
Diego Bassani
|
Conflict and Health |
| Risk for covid-19 resurgence related to duration and effectiveness of physical distancing in ontario, canada |
David Fisman,
Amy Greer,
Ashleigh Tuite
|
Annals of Internal Medicine |
| Multi-dose Oral Ondansetron for Pediatric Gastroenteritis: Study Protocol for the multi-DOSE oral ondansetron for pediatric Acute GastroEnteritis (DOSE-AGE) pragmatic randomized controlled trial |
Christopher McCabe
|
Trials |
| Efficacy and safety of convalescent plasma for severe COVID-19 based on evidence in other severe respiratory viral infections: a systematic review and meta-analysis |
Mark Loeb
|
CMAJ |
| A hybrid gravity and route choice model to assess vector traffic in large-scale road networks |
Mark Lewis
|
Royal Society Open Science |
| Transient dynamics of a stoichiometric cyanobacteria model via multiple-scale analysis |
Mark Lewis
|
SIAM Journal on Applied Mathematics |
| Feasibility and preliminary effectiveness of group antenatal care in Senegalese health posts: A pilot implementation trial |
Diego Bassani
|
Health Policy and Planning |
| Real-time PCR-based SARS-CoV-2 detection in Canadian laboratories |
Natalie Prystajecky
|
Journal of Clinical Virology |
| The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak |
Jonathan Dushoff
|
Epidemics |
| Calibration of individual-based models to epidemiological data: A systematic review |
Jonathan Dushoff
|
PLoS Computational Biology |
| Implicit hype? Representations of platelet rich plasma in the news media |
Timothy Caulfield
|
PLoS ONE |
| Social evolution under demographic stochasticity |
Troy Day
|
PLoS Computational Biology |
| Correction: Male and female bees show large differences in floral preference(PLoS ONE (2019)14:4 (e0214909)Doi:10.1371/journal.pone.0214909) |
Jonathan Dushoff
|
PLoS ONE |
| Male and female bees show large differences in floral preference |
Jonathan Dushoff
|
PLoS ONE |
| Intrinsic dimensionality of human behavioral activity data |
Nathaniel Osgood
|
PLoS ONE |
| Turning conceptual systems maps into dynamic simulation models: An Australian case study for diabetes in pregnancy |
Nathaniel Osgood
|
PLoS ONE |
| Nurse-led medicines' monitoring in care homes, implementing the Adverse Drug Reaction (ADRe) Profile improvement initiative for mental health medicines: An observational and interview study |
Jeff Round
|
PLoS ONE |
| Social and structural factors associated with substance use within the support network of adults living in precarious housing in a socially marginalized neighborhood of Vancouver, Canada |
Alexander Rutherford
|
PLoS ONE |
| Streptococcus agalactiae is not always an obligate intramammary pathogen: Molecular epidemiology of GBS from milk, feces and environment in Colombian dairy herds |
Javier Sanchez
|
PLoS ONE |
| Effect of influenza vaccination of children on infection rate in hutterite communities: Follow-up study of a randomized trial |
David Earn
|
PLoS ONE |
| Control of an HIV epidemic among injection drug users: Simulation modeling on complex networks |
Alexander Rutherford
|
Proceedings - Winter Simulation Conference |
| The distance and median problems in the single-cut-or-join model with single-gene duplications |
Cedric Chauve
|
Algorithms for Molecular Biology |
| Erratum: Interactive effects of tree size, crown exposure and logging on drought-induced mortality (Philosophical Transactions of the Royal Society B: Biological Sciences (2018) 373 (20180189) DOI: 10.1098/rstb.2018.0189) |
Benjamin Bolker
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| Exponentially few RNA structures are designable |
Cedric Chauve
|
ACM-BCB 2019 - Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics |
| Quantification of small-scale heterogeneity in aquatic aminopeptidase activity |
Brian Gaas
|
Aquatic Microbial Ecology |
| Treatment of patients with nonsevere and severe coronavirus disease 2019: An evidencebased guideline |
Mark Loeb
|
CMAJ |
| A simple model for COVID-19 |
Julien Arino
|
Infectious Disease Modelling |
| Non-Invasive Prenatal Screening: Navigating the Relevant Legal Norms |
Timothy Caulfield
|
Journal of Obstetrics and Gynaecology Canada |
| Estimation of COVID-19 burden in Egypt – Authors' reply |
Ashleigh Tuite
|
The Lancet Infectious Diseases |
| Characterizing the distinctive acoustic cues of Mandarin tones |
Paul Tupper
|
Journal of the Acoustical Society of America |
| Risk of Cardiovascular Events and Mortality Among Elderly Patients With Reduced GFR Receiving Direct Oral Anticoagulants |
Doug Manuel
|
American Journal of Kidney Diseases |
| Search for Electron Antineutrino Appearance in a Long-Baseline Muon Antineutrino Beam |
Dean Karlen,
Dean Karlen
|
Physical Review Letters |
| Enhancing the monitoring of fallen stock at different hierarchical administrative levels: An illustration on dairy cattle from regions with distinct husbandry, demographical and climate traits |
Javier Sanchez
|
BMC Veterinary Research |
| Simultaneous optimization of isocenter locations and sector duration in radiosurgery |
Dionne Aleman
|
Physics in Medicine and Biology |
| Modeling and comparison of alternative approaches for sector duration optimization in a dedicated radiosurgery system |
Dionne Aleman
|
Physics in Medicine and Biology |
| Estimating the population impact of hypothetical breastfeeding interventions in a low-income population in Los Angeles County: An agent-based model |
Nathaniel Osgood
|
PLoS ONE |
| Predicting the short-term success of human influenza virus variants with machine learning |
Caroline Colijn
|
Proceedings of the Royal Society B: Biological Sciences |
| Breakpoint distance and PQ-trees |
Cedric Chauve
|
Information and Computation |
| Targeted resequencing of wetland sediment as a tool for avian influenza virus surveillance |
Natalie Prystajecky
|
Journal of Wildlife Diseases |
| Real-world direct healthcare costs of treating recurrent high-grade serous ovarian cancer with cytotoxic chemotherapy |
Michael Wolfson
|
Journal of Comparative Effectiveness Research |
| Surviving Sepsis Campaign: guidelines on the management of critically ill adults with Coronavirus Disease 2019 (COVID-19) |
Mark Loeb
|
Intensive Care Medicine |
| A Curious Possible Prime Pattern |
Benjamin Bolker
|
Mathematics Magazine |
| Two cases of type-a haemophilus influenzae meningitis within the same week in the same hospital are phylogenetically unrelated but recently exchanged capsule genes |
Jesse Shapiro
|
Microbial Genomics |
| Estimation of the COVID-19 burden in Egypt through exported case detection |
Ashleigh Tuite
|
The Lancet Infectious Diseases |
| Diversity within mutualist guilds promotes coexistence and reduces the risk of invasion from an alien mutualist |
Rebecca Tyson
|
Proceedings of the Royal Society B: Biological Sciences |
| PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals |
Cedric Chauve
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| Classification of origin with feature selection and network construction for folk tunes |
Caroline Colijn
|
Pattern Recognition Letters |
| Modeling the dispersal–reproduction trade-off in an expanding population |
Mark Lewis
|
Theoretical Population Biology |
| Policy Challenges for Organ Allocation in an Era of “Precision Medicine” |
Timothy Caulfield
|
Canadian Journal of Kidney Health and Disease |
| Bayesian risk assessment model of human cryptosporidiosis cases following consumption of raw Eastern oysters (Crassostrea virginica) contaminated with Cryptosporidium oocysts in the Hillsborough River system in Prince Edward Island, Canada |
Javier Sanchez
|
Food and Waterborne Parasitology |
| The ecology of medical care for adults in Alberta, 2002/03 to 2016/17: a retrospective cohort study |
Larry Svenson
|
CMAJ open |
| Effects of contemporary land-use and land-cover change on the carbon balance of terrestrial ecosystems in the United States |
Colin Daniel
|
Environmental Research Letters |
| Prevalence and mechanisms of azole resistance in clinical isolates of Aspergillus section Fumigati species in a Canadian tertiary care centre, 2000 to 2013 |
Sandrine Moreira
|
Journal of Antimicrobial Chemotherapy |
| A maximum entropy method for the prediction of size distributions |
Caroline Colijn
|
Entropy |
| The Price equation and evolutionary epidemiology |
Troy Day
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| Annals On Call - Understanding the Spread of COVID-19 |
David Fisman
|
Annals of internal medicine |
| Developing evidence-based guidance for assessment of suspected infections in care home residents |
Mark Loeb
|
BMC Geriatrics |
| A Note on Observation Processes in Epidemic Models |
Benjamin Bolker
|
Bulletin of Mathematical Biology |
| A Posteriori Error Estimation and Adaptive Discretization Refinement Using Adjoint Methods in CEM: A Study with a 1-D Higher Order FEM Scattering Example |
Donald Estep
|
IEEE Transactions on Antennas and Propagation |
| Femtosecond Laser-Assisted Cataract Surgery Versus Phacoemulsification Cataract Surgery (FACT): A Randomized Noninferiority Trial |
Jeff Round
|
Ophthalmology |
| Portrayal of umbilical cord blood research in the North American popular press: Promise or hype? |
Timothy Caulfield
|
Regenerative Medicine |
| Assessing impact of MALDI mass spectroscopy on reducing directed antibiotic coverage time for Gram-negative organisms |
Mark Loeb
|
PLoS ONE |
| Effects of updated demography, disability weights, and cervical cancer burden on estimates of human papillomavirus vaccination impact at the global, regional, and national levels: a PRIME modelling study |
Marc Brisson
|
The Lancet Global Health |
| Benchmarking bacterial genome-wide association study methods using simulated genomes and phenotypes |
Jesse Shapiro
|
Microbial Genomics |
| Analysis of propagation for impulsive reaction-diffusion models |
Mark Lewis
|
SIAM Journal on Applied Mathematics |
| Re: Van Asten et al.: No CFH/ARMS2 interaction with omega-3 fatty acids, low vs high zinc, or β-carotene versus Lutein and Zeaxanthin on progression of age-related macular degeneration in the Age-Related Eye Disease Study 2: Age-Related Eye Disease Study 2 Report No. 18 (Ophthalmology. 2019;126:1541-1548) |
Rafal Kustra
|
Ophthalmology |
| Evolutionary consequences of feedbacks between within-host competition and disease control |
Troy Day
|
Evolution, Medicine and Public Health |
| 2019 community-acquired pneumonia treatment guidelines: There is a need for a change toward more parsimonious antibiotic use |
Mark Loeb
|
American Journal of Respiratory and Critical Care Medicine |
| Dataset of mountain pine beetle outbreak dynamics and direct control in Cypress Hills, SK |
Mark Lewis
|
Data in Brief |
| Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models |
Cedric Chauve
|
Journal of Mathematical Biology |
| Female infants are more susceptible to the effects of maternal antenatal depression; findings from the Pelotas (Brazil) Birth Cohort Study |
Diego Bassani
|
Journal of Affective Disorders |
| HPV vaccination and sexual behaviour in healthcare seeking young women in Luxembourg |
Marc Brisson
|
PeerJ |
| Compliance rates, advantages, and drawbacks of a smartphone-based method of collecting food history and foodborne illness data |
Nathaniel Osgood
|
Journal of Food Protection |
| Foodborne outbreak investigation: Effect of recall inaccuracies on food histories |
Nathaniel Osgood
|
Journal of Food Protection |
| A survey of raw frozen breaded chicken products for salmonella in British Columbia, Canada, and phylogenetically associated illnesses |
Natalie Prystajecky
|
Journal of Food Protection |
| The fundamental advantages of temporal networks |
Sean Cornelius
|
Science |
| Modifiable factors related to life-space mobility in community-dwelling older adults: Results from the Canadian Longitudinal Study on Aging |
Jonathan Dushoff
|
BMC Geriatrics |
| Mortality impact of achieving WHO cervical cancer elimination targets: a comparative modelling analysis in 78 low-income and lower-middle-income countries |
Marc Brisson
|
The Lancet |
| Impact of HPV vaccination and cervical screening on cervical cancer elimination: a comparative modelling analysis in 78 low-income and lower-middle-income countries |
Marc Brisson
|
The Lancet |
| Mountain pine beetle outbreak duration and pine mortality depend on direct control effort |
Mark Lewis
|
Journal of Environmental Management |
| Population-level impact of human papillomavirus vaccination – Authors' reply |
Marc Brisson
|
The Lancet |
| Measurement of the muon neutrino charged-current single π+ production on hydrocarbon using the T2K off-axis near detector ND280 |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Three-dimensional structure model and predicted ATP interaction rewiring of a deviant RNA ligase 2 |
Sandrine Moreira
|
BMC Structural Biology |
| Density Dependence, Senescence, and Williams’ Hypothesis |
Troy Day
|
Trends in Ecology and Evolution |
| Social values for health technology assessment in Canada: A scoping review of hepatitis C screening, diagnosis and treatment |
Christopher McCabe
|
BMC Public Health |
| Use of medications by breastfeeding women in the 2015 pelotas (Brazil) birth cohort study |
Diego Bassani
|
International Journal of Environmental Research and Public Health |
| Sources of viral respiratory infections in Canadian acute care hospital healthcare personnel |
Mark Loeb
|
Journal of Hospital Infection |
| The Timing and Nature of Behavioural Responses Affect the Course of an Epidemic |
Rebecca Tyson
|
Bulletin of Mathematical Biology |
| Simultaneous prediction of multiple outcomes using revised stacking algorithms |
Xuekui Zhang
|
Bioinformatics |
| Validity of the Brief Infant Sleep Questionnaire (BISQ) in Brazilian children |
Diego Bassani
|
Sleep Medicine |
| Influenza increases invasive meningococcal disease risk in temperate countries |
David Fisman,
Ashleigh Tuite
|
Clinical Microbiology and Infection |
| Mathematical epidemiology in a data-rich world |
Julien Arino
|
Infectious Disease Modelling |
| Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies |
Cedric Chauve
|
BMC Biology |
| Genetic risk for dengue hemorrhagic fever and dengue fever in multiple ancestries |
Mark Loeb
|
EBioMedicine |
| Generalizing Outside the Training Set: When Can Neural Networks Learn Identity Effects? |
Paul Tupper
|
Proceedings for the 42nd Annual Meeting of the Cognitive Science Society: Developing a Mind: Learning in Humans, Animals, and Machines, CogSci 2020 |
| Measurement of neutrino and antineutrino neutral-current quasielasticlike interactions on oxygen by detecting nuclear deexcitation γ rays |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Capture of complete ciliate chromosomes in single sequencing reads reveals widespread chromosome isoforms |
Sandrine Moreira
|
BMC Genomics |
| Systematic comparison of coexistence in models of drug-sensitive and drug-resistant pathogen strains |
Caroline Colijn,
Alexander Rutherford
|
Theoretical Population Biology |
| Pandemic influenza: Modelling and public health perspectives |
Julien Arino
|
Mathematical Biosciences and Engineering |
| Effect of Parental Counseling on Infants' Healthy Sleep Habits in Brazil: A Randomized Clinical Trial |
Diego Bassani
|
JAMA network open |
| Efficacy and immunogenicity of a single dose of human papillomavirus vaccine compared to no vaccination or standard three and two-dose vaccination regimens: A systematic review of evidence from clinical trials |
Marc Brisson
|
Vaccine |
| Diffusion analysis of single particle trajectories in a Bayesian nonparametrics framework |
Daniel Coombs
|
Physical Biology |
| Deconvoluting the diversity of within-host pathogen strains in a multi-locus sequence typing framework |
Cedric Chauve
|
BMC Bioinformatics |
| One-Way Sensitivity Analysis for Probabilistic Cost-Effectiveness Analysis: Conditional Expected Incremental Net Benefit |
Christopher McCabe
|
PharmacoEconomics |
| Corrigendum to “Randomized controlled trial of influenza vaccine in patients with heart failure to reduce adverse vascular events (IVVE): Rationale and design” (American Heart Journal (2019) 212 (36–44), (S0002870319300432), (10.1016/j.ahj.2019.02.009)) |
Mark Loeb
|
American Heart Journal |
| Effectiveness and cost-effectiveness of human papillomavirus vaccination through age 45 years in the United States |
Marc Brisson
|
Annals of Internal Medicine |
| Negative-Type Diversities, a Multi-dimensional Analogue of Negative-Type Metrics |
Paul Tupper
|
Journal of Geometric Analysis |
| Are healthcare personnel at higher risk of seasonal influenza than other working adults? |
Mark Loeb
|
Infection Control and Hospital Epidemiology |
| Cost-effectiveness analysis of metformin with enzalutamide in the metastatic castrate-resistant prostate cancer setting |
Christopher McCabe
|
The Canadian journal of urology |
| Epidemiology of Diabetes in Pregnancy Among First Nations and Non-First Nations Women in Saskatchewan, 1980‒2013. Part 2: Predictors and Early Complications; Results From the DIP: ORRIIGENSS Project |
Nathaniel Osgood
|
Canadian Journal of Diabetes |
| The role of mathematical modelling in aiding public health policy decision-making: A case study of the BC opioid overdose emergency |
Daniel Coombs
|
International Journal of Drug Policy |
| Social media surveillance for outbreak projection via transmission models: Longitudinal observational study |
Nathaniel Osgood
|
JMIR Public Health and Surveillance |
| Seeking the optimal schedule for chickenpox vaccination in Canada: Using an agent-based model to explore the impact of dose timing, coverage and waning of immunity on disease outcomes |
Nathaniel Osgood
|
Vaccine |
| Current Trends in Mathematical Epidemiology |
Julien Arino
|
Bulletin of Mathematical Biology |
| Short communication: Whole-genome sequence analysis of 4 fecal bla<inf>CMY-2</inf>-producing Escherichia coli isolates from Holstein dairy calves |
Javier Sanchez
|
Journal of Dairy Science |
| The “subluxation” issue: an analysis of chiropractic clinic websites |
Timothy Caulfield
|
Archives of Physiotherapy |
| Agreement of antenatal care indicators from self-reported questionnaire and the antenatal care card of women in the 2015 Pelotas birth cohort, Rio Grande do Sul, Brazil |
Diego Bassani
|
BMC Pregnancy and Childbirth |
| Epidemiology of Diabetes in Pregnancy Among First Nations and Non-First Nations Women in Saskatchewan, 1980‒2013. Part 1: Populations, Methodology and Frequencies (1980‒2009); Results From the DIP: ORRIIGENSS Project |
Nathaniel Osgood
|
Canadian Journal of Diabetes |
| Comparative effectiveness and cost-effectiveness analysis of a urine metabolomics test vs. alternative colorectal cancer screening strategies |
Larry Svenson
|
International Journal of Colorectal Disease |
| Error estimation and uncertainty quantification based on adjoint methods in computational electromagnetics |
Donald Estep
|
2019 IEEE International Symposium on Antennas and Propagation and USNC-URSI Radio Science Meeting, APSURSI 2019 - Proceedings |
| HyAsP, a greedy tool for plasmids identification |
Cedric Chauve
|
Bioinformatics |
| Correction to: Determinants of Influenza Mortality Trends: Age-Period-Cohort Analysis of Influenza Mortality in the United States, 1959–2016 (Demography, (2019), 56, 5, (1723-1746), 10.1007/s13524-019-00809-y) |
David Earn
|
Demography |
| Overview of some advances in higher order frequency-domain CEM techniques |
Donald Estep
|
Proceedings of the 2019 21st International Conference on Electromagnetics in Advanced Applications, ICEAA 2019 |
| Treatment of urinary tract infections in the era of antimicrobial resistance and new antimicrobial agents |
Mark Loeb
|
Postgraduate Medicine |
| The health and economic burden of pertussis in Canada: A microsimulation study |
David Fisman
|
Vaccine |
| “Any news?” Special issue in honor of Marcus Feldman's 75th birthday |
Sarah Otto
|
Theoretical Population Biology |
| Functional Diversity: An Epistemic Roadmap |
Jesse Shapiro
|
BioScience |
| Comparing alternating pressure mattresses and high-specification foam mattresses to prevent pressure ulcers in high-risk patients: The PRESSURE 2 RCT |
Christopher McCabe
|
Health Technology Assessment |
| Measurement of the muon neutrino charged-current cross sections on water, hydrocarbon and iron, and their ratios, with the T2K on-axis detectors |
Dean Karlen,
Dean Karlen
|
Progress of Theoretical and Experimental Physics |
| HIV control strategies for sex worker–client contact networks |
Alexander Rutherford
|
Journal of the Royal Society Interface |
| The sampling distribution of the total correlation for multivariate Gaussian Random variables |
Troy Day
|
Entropy |
| Evaluating the Potential for Sea Lice to Evolve Freshwater Tolerance as a Consequence of Freshwater Treatments in Salmon Aquaculture |
Javier Sanchez
|
Aquaculture Environment Interactions |
| Random fluctuations around a stable limit cycle in a stochastic system with parametric forcing |
Rebecca Tyson
|
Journal of Mathematical Biology |
| Hard choices: Reflections from the tomb of the unknown patient |
Christopher McCabe,
Jeff Round
|
Healthcare Management Forum |
| Search for heavy neutrinos with the T2K near detector ND280 |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Particulate matter exposure induces persistent lung inflammation and endothelial dysfunction |
Xuekui Zhang
|
American Journal of Physiology - Lung Cellular and Molecular Physiology |
| HPV-FRAME: A consensus statement and quality framework for modelled evaluations of HPV-related cancer control |
Marc Brisson
|
Papillomavirus Research |
| Patterns of seasonal and pandemic influenza-associated health care and mortality in Ontario, Canada |
Benjamin Bolker,
Jonathan Dushoff,
David Earn
|
BMC Public Health |
| Fighting the Public Health Burden of AIDS with the Human Pegivirus |
Troy Day
|
American Journal of Epidemiology |
| A sheep in Wolf’s clothing: Levels of deceit and detection in the evolution of cue-mimicry |
Sarah Otto
|
Proceedings of the Royal Society B: Biological Sciences |
| Theory in service of narratives in evolution and ecology |
Sarah Otto
|
American Naturalist |
| A Rheological Study of the Association and Dynamics of MUC5AC Gels |
Caroline Wagner
|
Biomacromolecules |
| Predicting the impact of clustered risk and testing behaviour patterns on the population-level effectiveness of pre-exposure prophylaxis against HIV among gay, bisexual and other men who have sex with men in Greater Vancouver, Canada |
Daniel Coombs
|
Epidemics |
| The Application of a Mathematical Model to Evaluate the Effectiveness of Control Strategies Against Ciona intestinalis in Mussel Production |
Javier Sanchez
|
Frontiers in Veterinary Science |
| Bayesian methods for time series of count data |
Nathaniel Osgood
|
Communications in Statistics: Simulation and Computation |
| MentaLiST - A fast MLST caller for large MLST schemes |
Cedric Chauve
|
Microbial genomics |
| Validation of the Seegene RV15 multiplex PCR for the detection of influenza A subtypes and influenza B lineages during national influenza surveillance in hospitalized adults |
Mark Loeb
|
Journal of Medical Microbiology |
| Vibrio cholerae genomic diversity within and between patients |
Jesse Shapiro
|
Microbial Genomics |
| Predicting West Nile virus transmission in North American bird communities using phylogenetic mixed effects models and eBird citizen science data |
Benjamin Bolker
|
Parasites and Vectors |
| Intermediate filament dynamics: Disassembly regulation |
Julien Arino
|
International Journal of Biomathematics |
| Skewed temperature dependence affects range and abundance in a warming world |
Amy Hurford
|
Proceedings of the Royal Society B: Biological Sciences |
| Regulatory and policy tools to address unproven stem cell interventions in Canada: The need for action |
Timothy Caulfield
|
BMC Medical Ethics |
| Invariant predictions of epidemic patterns from radically different forms of seasonal forcing |
David Earn
|
Journal of the Royal Society Interface |
| The burden of influenza in older adults: meeting the challenge |
Mark Loeb
|
Aging Clinical and Experimental Research |
| Regularity underlies erratic population abundances in marine ecosystems |
Sean Cornelius
|
Journal of the Royal Society Interface |
| A Lévy-flight diffusion model to predict transgenic pollen dispersal |
Rebecca Tyson
|
Journal of the Royal Society Interface |
| Interactive effects of tree size, crown exposure and logging on drought-induced mortality |
Benjamin Bolker
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| A novel Bayesian approach to predicting reductions in HIV incidence following increased testing interventions among gay, bisexual and other men who have sex with men in Vancouver, Canada |
Daniel Coombs
|
Journal of the Royal Society Interface |
| Pathogen evolution in finite populations: Slow and steady spreads the best |
Troy Day
|
Journal of the Royal Society Interface |
| Modelling the transmission dynamics of Campylobacter in Ontario, Canada, assuming house flies, Musca domestica, are a mechanical vector of disease transmission |
David Fisman
|
Royal Society Open Science |
| Host allometry influences the evolution of parasite host-generalism: Theory and meta-analysis |
Amy Hurford
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| Mechanistic movement models to understand epidemic spread |
Amy Hurford
|
Philosophical Transactions of the Royal Society B: Biological Sciences |
| Next-generation tools for evolutionary invasion analyses |
Amy Hurford
|
Journal of the Royal Society Interface |
| A paradox of state-dependent diffusion and how to resolve it |
Paul Tupper
|
Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences |
| The association between influenza vaccination and socioeconomic status in high income countries varies by the measure used: A systematic review |
Larry Svenson
|
BMC Medical Research Methodology |
| Branch-and-check methods for multi-level operating room planning and scheduling |
Dionne Aleman
|
International Journal of Production Economics |
| Pitfalls of prioritizing cost-effectiveness in the assessment of medical innovation: A comment on Wallis and Detsky guest editorial |
Christopher McCabe
|
Journal of the Canadian Urological Association |
| Molecular variability of streptococcus uberis isolates from intramammary infections in canadian dairy farms from the maritime region |
Javier Sanchez
|
Canadian Journal of Veterinary Research |
| Individual-based modelling of black bear (Ursus americanus) foraging in Whistler, BC: Reducing human-bear interactions |
Rebecca Tyson
|
Ecological Modelling |
| Apparent shear thickening at low shear rates in polymer solutions can be an artifact of non-equilibration |
Caroline Wagner
|
Applied Rheology |
| Search for neutral-current induced single photon production at the ND280 near detector in T2K |
Dean Karlen,
Dean Karlen
|
Journal of Physics G: Nuclear and Particle Physics |
| Injury-related health services use and mortality among Métis people in Alberta |
Larry Svenson
|
Canadian Journal of Public Health |
| The relative impact of community and hospital antibiotic use on the selection of extended-spectrum beta-lactamase-producing Escherichia coli |
David Fisman
|
Clinical Infectious Diseases |
| Voter models and external influence |
Rebecca Tyson
|
Journal of Mathematical Sociology |
| Regional climate affects salmon lice dynamics, stage structure and management |
Amy Hurford
|
Proceedings of the Royal Society B: Biological Sciences |
| Assessment of population immunity to measles in Ontario, Canada: a Canadian Immunization Research Network (CIRN) study |
Marc Brisson
|
Human Vaccines and Immunotherapeutics |
| 6 versus 12 months of adjuvant trastuzumab for HER2-positive early breast cancer (PERSEPHONE): 4-year disease-free survival results of a randomised phase 3 non-inferiority trial |
Christopher McCabe
|
The Lancet |
| Dynamics and persistence of rabies in the Arctic |
Amy Hurford
|
Polar Research |
| Alignment-free clustering of UMI tagged DNA molecules |
Cedric Chauve
|
Bioinformatics |
| Arp2/3 complex-driven spatial patterning of the BCR enhances immune synapse formation, BCR signaling and b cell activation |
Daniel Coombs
|
eLife |
| Planning Capacity for Mental Health and Addiction Services in the Emergency Department: A Discrete-Event Simulation Approach |
Dionne Aleman
|
Journal of Healthcare Engineering |
| Acellular pertussis vaccine effectiveness and waning immunity in Alberta, Canada: 2010–2015, a Canadian Immunization Research Network (CIRN) study |
Larry Svenson
|
Vaccine |
| Erratum: Analysis of emergency department length of stay for mental health visits: A case study of a Canadian academic hospital (Canadian Journal of Emergency Medicine (2019) 21:3 (374-383) DOI: 10.1017/cem.2018.417) |
Dionne Aleman
|
Canadian Journal of Emergency Medicine |
| Caring for Carers: Positive and Normative Challenges for Future Research on Carer Spillover Effects in Economic Evaluation |
Jeff Round
|
Value in Health |
| Protecting biodiversity in British Columbia: Recommendations for developing species at risk legislation |
Sarah Otto
|
Facets |
| Adjoint-based uncertainty quantification in frequency-domain double higher-order fem |
Donald Estep
|
2019 International Applied Computational Electromagnetics Society Symposium in Miami, ACES-Miami 2019 |
| Search for light sterile neutrinos with the T2K far detector Super-Kamiokande at a baseline of 295 km |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Microbial evolutionary medicine: from theory to clinical practice |
Jesse Shapiro
|
The Lancet Infectious Diseases |
| Influenza vaccine effectiveness in preventing influenza-associated hospitalizations during pregnancy: A multi-country retrospective test negative design study, 2010–2016 |
Larry Svenson
|
Clinical Infectious Diseases |
| Weather and livestock risk factors for Escherichia coli O157 human infection in Alberta, Canada |
Larry Svenson
|
Epidemiology and Infection |
| Multiple Sclerosis Mortality Rates in Canada, 1975-2009 |
Larry Svenson
|
Canadian Journal of Neurological Sciences |
| Medical tourism for CCSVI procedures in people with multiple sclerosis: An observational study |
Larry Svenson
|
Canadian Journal of Neurological Sciences |
| Probability of Rhipicephalus microplus introduction into farms by cattle movement using a Bayesian Belief Network |
Javier Sanchez
|
Ticks and Tick-borne Diseases |
| Traditional Male Circumcision is Associated with Sexual Risk Behaviors in Sub-Saharan Countries Prioritized for Male Circumcision |
Jonathan Dushoff
|
AIDS and Behavior |
| Pertussis vaccine effectiveness in a frequency matched population-based case-control Canadian Immunization Research Network study in Ontario, Canada 2009–2015 |
Larry Svenson
|
Vaccine |
| Outbreaks of Norovirus and Acute Gastroenteritis Associated with British Columbia Oysters, 2016–2017 |
Natalie Prystajecky
|
Food and Environmental Virology |
| First among equals: Comment on “Redundancy principle and the role of extreme statistics in molecular and cellular biology” by Z. Schuss, K. Basnayake and D. Holcman |
Daniel Coombs
|
Physics of Life Reviews |
| Connectionist approaches to generative phonology |
Paul Tupper
|
The Routledge Handbook of Phonological Theory |
| Number of Source Patches Required for Population Persistence in a Source–Sink Metapopulation with Explicit Movement |
Julien Arino
|
Bulletin of Mathematical Biology |
| Reformulation, linearization, and decomposition techniques for balanced distributed operating room scheduling |
Dionne Aleman
|
Omega (United Kingdom) |
| A response to “Personalised medicine and population health: breast and ovarian cancer” |
Michael Wolfson
|
Human Genetics |
| Incorporating movement patterns to discern habitat selection: Black bears as a case study |
Benjamin Bolker
|
Wildlife Research |
| Eliciting patients' preferences for cigarette and alcohol cessation: An application of conjoint analysis |
Alan Diener
|
Addictive Behaviors |
| Prevalence of hock, knee, and neck skin lesions and associated risk factors in dairy herds in the Maritime Provinces of Canada |
Javier Sanchez
|
Journal of Dairy Science |
| Prevalence of lameness and associated risk factors on dairy farms in the Maritime Provinces of Canada |
Javier Sanchez
|
Journal of Dairy Science |
| Non-Gaussian, non-ergodic, and non-Fickian diffusion of tracers in mucin hydrogels |
Caroline Wagner
|
Soft Matter |
| Managing Marek's disease in the egg industry |
Troy Day
|
Epidemics |
| A Posteriori Element-wise Error Quantification for FEM Solvers Using Higher Order Basis Functions |
Donald Estep
|
2018 IEEE Antennas and Propagation Society International Symposium and USNC/URSI National Radio Science Meeting, APSURSI 2018 - Proceedings |
| Efficiently identifying critical nodes in large complex networks |
Dionne Aleman
|
Computational Social Networks |
| Decision support for optimal use of joint training funds in the Canadian armed forces |
Matthew MacLeod
|
Analytics, Operations, and Strategic Decision Making in the Public Sector |
| A spatially explicit model for an Allee effect: Why wolves recolonize so slowly in Greater Yellowstone |
Amy Hurford
|
Theoretical Population Biology |
| A practical generation-interval-based approach to inferring the strength of epidemics from their speed |
Jonathan Dushoff
|
Epidemics |
| Latest results from the T2K neutrino experiment |
Dean Karlen,
Dean Karlen
|
Universe |
| A pooled analysis of FEV<inf>1</inf> decline in COPD patients randomized to inhaled corticosteroids or placebo |
Xuekui Zhang
|
Chest |
| (When) Do hub airlines internalize their self-imposed congestion delays? |
Kate Harback
|
Journal of Urban Economics |
| Preface |
Sean Cornelius
|
Springer Proceedings in Complexity |
| Adjoint methods for uncertainty quantification in applied computational electromagnetics: FEM scattering examples |
Donald Estep
|
Applied Computational Electromagnetics Society Journal |
| Some topics in theoretical population genetics: Editorial commentaries on a selection of Marc Feldman's TPB papers |
Sarah Otto
|
Theoretical Population Biology |
| Pricing the major US hub airports |
Kate Harback
|
Journal of Urban Economics |
| Budesonide and the risk of pneumonia: a meta-analysis of individual patient data |
Xuekui Zhang
|
The Lancet |
| Improving the numerical convergence of viscous-plastic sea ice models with the Jacobian-free Newton-Krylov method |
Paul Tupper
|
Journal of Computational Physics |
| Prevalence, mortality and risk factors associated with very low birth weight preterm infants: an analysis of 33 years |
Diego Bassani
|
Jornal de Pediatria |
| Equivalence of the Erlang-distributed SEIR epidemic model and the renewal equation |
David Earn
|
SIAM Journal on Applied Mathematics |
| Effect of media-induced social distancing on disease transmission in a two patch setting |
Julien Arino
|
Mathematical Biosciences |
| Infectious disease surveillance and modelling across geographic frontiers and scientific specialties |
Julien Arino
|
The Lancet Infectious Diseases |
| On the well-posedness of the stochastic Allen-Cahn equation in two dimensions |
Paul Tupper
|
Journal of Computational Physics |
| How to pay for national pharmacare |
Michael Wolfson
|
CMAJ |
| Symptom clusters in a population-based ambulatory cancer cohort validated using bootstrap methods |
Rafal Kustra
|
European Journal of Cancer |
| Combining mirtazapine with ssris or snris for treatment-resistant depression: The MIR RCT |
Jeff Round
|
Health Technology Assessment |
| Hyperconvexity and tight-span theory for diversities |
Paul Tupper
|
Advances in Mathematics |
| In vivo quantitative analysis of Talin turnover in response to force |
Daniel Coombs
|
Molecular Biology of the Cell |
| Applications of Adjoint Solutions for Predicting and Analyzing Numerical Error of Forward Solutions Based on Higher Order Finite Element Modeling |
Donald Estep
|
Proceedings of the 2018 20th International Conference on Electromagnetics in Advanced Applications, ICEAA 2018 |
| Functional-Network-Based Gene Set Analysis Using Gene-Ontology |
Rafal Kustra
|
PLoS ONE |
| Benefits and unintended consequences of antimicrobial de-escalation: Implications for stewardship programs |
Amy Hurford
|
PLoS ONE |
| Search for CP Violation in Neutrino and Antineutrino Oscillations by the T2K Experiment with 2.2×1021 Protons on Target |
Dean Karlen,
Dean Karlen
|
Physical Review Letters |
| Refining hypertension surveillance to account for potentially misclassified cases |
Larry Svenson
|
PLoS ONE |
| Effects of spatiotemporal HSV-2 lesion dynamics and antiviral treatment on the risk of HIV-1 acquisition |
Daniel Coombs
|
PLoS Computational Biology |
| Probabilistic inference for nucleosome positioning with mnase-based or sonicated short-read data |
Xuekui Zhang
|
PLoS ONE |
| An integrated pipeline for the genome-wide analysis of transcription factor binding sites from ChiP-Seq |
Xuekui Zhang
|
PLoS ONE |
| The Influence of Climate and Livestock Reservoirs on Human Cases of Giardiasis |
David Fisman
|
EcoHealth |
| Determinants of the final size and case rate of nosocomial outbreaks |
Amy Hurford
|
PLoS ONE |
| GPS measurement error gives rise to spurious 180° turning angles and strong directional biases in animal movement data |
Amy Hurford
|
PLoS ONE |
| Linking antimicrobial prescribing to antimicrobial resistance in the ICU: Before and after an antimicrobial stewardship program |
Amy Hurford
|
Epidemics |
| Changing Risk Behaviours and the HIV Epidemic: A Mathematical Analysis in the Context of Treatment as Prevention |
Alexander Rutherford
|
PLoS ONE |
| Evidence that promotion of male circumcision did not lead to sexual risk compensation in prioritized Sub-Saharan countries |
Michael WZ Li
|
PLoS ONE |
| Phonological constraint induction in a connectionist network: Learning OCP-Place constraints from data |
Paul Tupper
|
Language Sciences |
| Expanding the Scope of Costs and Benefits for Economic Evaluations in Health: Some Words of Caution |
Christopher McCabe
|
PharmacoEconomics |
| The QuinteT Recruitment Intervention supported five randomized trials to recruit to target: a mixed-methods evaluation |
Christopher McCabe
|
Journal of Clinical Epidemiology |
| Shingles in Alberta: Before and after publicly funded varicella vaccination |
Larry Svenson
|
Vaccine |
| Stochastic Dynamics of the Latently Infected Cell Reservoir During HIV Infection |
Daniel Coombs
|
Bulletin of Mathematical Biology |
| Mucins and Their Role in Shaping the Functions of Mucus Barriers |
Caroline Wagner
|
Annual Review of Cell and Developmental Biology |
| DNA modification study of major depressive disorder: Beyond locus-by-locus comparisons |
Rafal Kustra
|
Biological Psychiatry |
| Use and utility of administrative health data for stroke research and surveillance |
Larry Svenson
|
Stroke |
| Fitting mechanistic epidemic models to data: A comparison of simple Markov chain Monte Carlo approaches |
Benjamin Bolker
|
Statistical Methods in Medical Research |
| A posteriori error analysis of IMEX multi-step time integration methods for advection-diffusion-reaction equations |
Donald Estep
|
Computer Methods in Applied Mechanics and Engineering |
| Adaptive finite element solution of multiscale PDE-ODE systems |
Donald Estep
|
Computer Methods in Applied Mechanics and Engineering |
| Stability and fluctuations in a simple model of phonetic category change |
Paul Tupper
|
SIAM Journal on Applied Dynamical Systems |
| An analytic solution for capillary thinning and breakup of FENE-P fluids |
Caroline Wagner
|
Journal of Non-Newtonian Fluid Mechanics |
| Fine particulate air pollution, nitrogen dioxide, and systemic autoimmune rheumatic disease in Calgary, Alberta |
Larry Svenson
|
Environmental Research |
| Evaluation of the natural history of cancer of the cervix, implications for prevention. The Cancer Risk Management Model (CRMM) - Human papillomavirus and cervical components |
Michael Wolfson
|
Journal of Cancer Policy |
| Design Parameters for Granzyme-Mediated Cytotoxic Lymphocyte Target-Cell Killing and Specificity |
Daniel Coombs
|
Biophysical Journal |
| Fine particulate air pollution and systemic autoimmune rheumatic disease in two Canadian provinces |
Larry Svenson
|
Environmental Research |
| Conditions for eradicating hepatitis C in people who inject drugs: A fibrosis aware model of hepatitis C virus transmission |
Daniel Coombs
|
Journal of Theoretical Biology |
| Exploring readiness for the adoption of new molecular water quality tests: Insights from interviews with policy makers, laboratory managers and watershed managers |
Natalie Prystajecky
|
Environment International |
| Theoretical impacts of habitat loss and generalist predation on predator-prey cycles |
Rebecca Tyson
|
Ecological Modelling |
| A model for sea lice (Lepeophtheirus salmonis) dynamics in a seasonally changing environment |
Amy Hurford
|
Epidemics |
| Adverse events following HPV vaccination, Alberta 2006-2014 |
Larry Svenson
|
Vaccine |
| The importance of flow history in mixed shear and extensional flows |
Caroline Wagner
|
Journal of Non-Newtonian Fluid Mechanics |
| Chronic lung disease and multiple sclerosis: Incidence, prevalence, and temporal trends |
Larry Svenson
|
Multiple Sclerosis and Related Disorders |
| Genes in Hiding |
Sandrine Moreira
|
Trends in Genetics |
| Impacts of management on Mountain Pine Beetle spread and damage: A process-rich model |
Rebecca Tyson
|
Ecological Modelling |
| Propagating logic-based Benders’ decomposition approaches for distributed operating room scheduling |
Dionne Aleman
|
European Journal of Operational Research |
| Biennial lung cancer screening in Canada with smoking cessation—outcomes and cost-effectiveness |
Michael Wolfson
|
Lung Cancer |
| Detecting introgression in anopheles mosquito genomes using a reconciliation-based approach |
Cedric Chauve
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| The rooted SCJ median with single gene duplications |
Cedric Chauve
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| Variation in the concentration of antibiotics in tissue during oral antibiotic treatments in farmed salmonids |
Javier Sanchez
|
Aquaculture |
| Does human education reduce conflicts between humans and bears? An agent-based modelling approach |
Rebecca Tyson
|
Ecological Modelling |
| First capture success in two dimensions: The search for prey by a random walk predator in a comprehensive space of random walks |
Rebecca Tyson
|
Ecological Complexity |
| Two approaches to forecast Ebola synthetic epidemics |
Benjamin Bolker
|
Epidemics |
| Quantifying the consistency and rheology of liquid foods using fractional calculus |
Caroline Wagner
|
Food Hydrocolloids |
| On the duration of the period between exposure to HIV and detectable infection |
Daniel Coombs
|
Epidemics |
| Spatio-temporal spread of infectious pathogens of humans |
Julien Arino
|
Infectious Disease Modelling |
| Incorporating uncertainty into forest management planning: Timber harvest, wildfire and climate change in the boreal forest |
Colin Daniel
|
Forest Ecology and Management |
| Value of Information Analysis of Multiparameter Tests for Chemotherapy in Early Breast Cancer: The OPTIMA Prelim Trial |
Christopher McCabe
|
Value in Health |
| Projected effect of fecal immunochemical test threshold for colorectal cancer screening on outcomes and costs for Canada using the OncoSim microsimulation model |
Michael Wolfson
|
Journal of Cancer Policy |
| Cell-Free DNA–Based Non-invasive Prenatal Screening for Common Aneuploidies in a Canadian Province: A Cost-Effectiveness Analysis |
Christopher McCabe
|
Journal of Obstetrics and Gynaecology Canada |
| Analysis of emergency department length of stay for mental health visits: A case study of a Canadian academic hospital |
Dionne Aleman
|
Canadian Journal of Emergency Medicine |
| Celebrity over science? An analysis of Lyme disease video content on YouTube |
Shelby Sturrock
|
Social Science and Medicine |
| Lancet Commission: Stem cells and regenerative medicine |
Jeff Round
|
The Lancet |
| Influence of selective treatment of bulls on the infestation of Haematobia irritans on untreated cows |
Javier Sanchez
|
Veterinary Parasitology |
| Time-varying and state-dependent recovery rates in epidemiological models |
Troy Day
|
Infectious Disease Modelling |
| Cirrhosis with ascites in the last year of life: a nationwide analysis of factors shaping costs, health-care use, and place of death in England |
Jeff Round
|
The Lancet Gastroenterology and Hepatology |
| Simulating results from trials of sigmoidoscopy screening using the OncoSim microsimulation model |
Michael Wolfson
|
Journal of Cancer Policy |
| Exposure to antimicrobial-resistant Escherichia coli through the consumption of ground beef in Western Canada |
Javier Sanchez
|
International Journal of Food Microbiology |
| Distribution of take-home opioid antagonist kits during a synthetic opioid epidemic in British Columbia, Canada: a modelling study |
Daniel Coombs
|
The Lancet Public Health |
| Counting, Generating, Analyzing and Sampling Tree Alignments |
Cedric Chauve
|
International Journal of Foundations of Computer Science |
| A multivariable assessment of the spatio-temporal distribution of pyrethroids performance on the sea lice Caligus rogercresseyi in Chile |
Javier Sanchez
|
Spatial and Spatio-temporal Epidemiology |
| Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework |
Cedric Chauve
|
IEEE/ACM Transactions on Computational Biology and Bioinformatics |
| Gene tree construction and correction using supertree and reconciliation |
Cedric Chauve
|
IEEE/ACM Transactions on Computational Biology and Bioinformatics |
| Designing pinning network controllability for interdependent dynamical networks |
Sean Cornelius
|
Proceedings of the American Control Conference |
| Using “Big Data” in the Cost-Effectiveness Analysis of Next-Generation Sequencing Technologies: Challenges and Potential Solutions |
Christopher McCabe
|
Value in Health |
| Balancing the Economics and Ethics of Personalised Oncology |
Christopher McCabe
|
Trends in Cancer |
| The SCJ Small Parsimony Problem for Weighted Gene Adjacencies |
Cedric Chauve
|
IEEE/ACM Transactions on Computational Biology and Bioinformatics |
| Spatial opinion dynamics and the effects of two types of mixing |
Rebecca Tyson
|
Physical Review E |
| Characterization of nuclear effects in muon-neutrino scattering on hydrocarbon with a measurement of final-state kinematics and correlations in charged-current pionless interactions at T2K |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Efficient distribution estimation and uncertainty quantification for elliptic problems on domains with stochastic boundaries |
Donald Estep
|
SIAM-ASA Journal on Uncertainty Quantification |
| Dynamic Energy Budget theory predicts smaller energy reserves in thyasirid bivalves that harbour symbionts |
Amy Hurford
|
Journal of Sea Research |
| PRINCE: Accurate approximation of the copy number of tandem repeats |
Cedric Chauve
|
Leibniz International Proceedings in Informatics, LIPIcs |
| Antimicrobial-based dry cow therapy approaches for cure and prevention of intramammary infections: A protocol for a systematic review and meta-analysis |
Javier Sanchez
|
Animal Health Research Reviews |
| Neptune: A bioinformatics tool for rapid discovery of genomic variation in bacterial populations |
Natalie Prystajecky
|
Nucleic Acids Research |
| Measurement of inclusive double-differential νμ charged-current cross section with improved acceptance in the T2K off-axis near detector |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Early Initiation of Tumor Necrosis Factor Antagonist–Based Therapy for Patients With Crohn's Disease Reduces Costs Compared With Late Initiation |
Christopher McCabe
|
Clinical Gastroenterology and Hepatology |
| Effects of limiting memory capacity on the behaviour of exemplar dynamics |
Paul Tupper
|
Journal of Applied Probability |
| Penetrance of Polygenic Obesity Susceptibility Loci across the Body Mass Index Distribution |
Benjamin Bolker
|
American Journal of Human Genetics |
| Salmonella enterica and extended-spectrum cephalosporin-resistant Escherichia coli recovered from Holstein dairy calves from 8 farms in New Brunswick, Canada |
Javier Sanchez
|
Journal of Dairy Science |
| Cooking and co-ingested polyphenols reduce in vitro methylmercury bioaccessibility from fish and may alter exposure in humans |
Jesse Shapiro
|
Science of the Total Environment |
| Relationship between enteric pathogens and acute gastroenteritis disease severity: a prospective cohort study |
Larry Svenson
|
Clinical Microbiology and Infection |
| FlowLearn: Fast and precise identification and quality checking of cell populations in flow cytometry |
Cedric Chauve
|
Bioinformatics |
| Forecasting Epidemiological and Evolutionary Dynamics of Infectious Diseases |
Troy Day
|
Trends in Ecology and Evolution |
| An observational study showed that explaining randomization using gambling-related metaphors and computer-agency descriptions impeded randomized clinical trial recruitment |
Christopher McCabe
|
Journal of Clinical Epidemiology |
| Alternative tumour necrosis factor inhibitors (TNFi) or abatacept or rituximab following failure of initial TNFi in rheumatoid arthritis: The SWITCH RCT |
Christopher McCabe
|
Health Technology Assessment |
| Assessing concentration of antibiotics in tissue during oral treatments against piscirickettsiosis |
Javier Sanchez
|
Preventive Veterinary Medicine |
| Modelling and solving the senior transportation problem |
Dionne Aleman
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| The role of phenotypic plasticity in moderating evolutionary conflict |
Troy Day
|
American Naturalist |
| Adjoint methods for uncertainty quantification in applied computational electromagnetics: FEM scattering examples |
Donald Estep
|
2018 International Applied Computational Electromagnetics Society Symposium in Denver, ACES-Denver 2018 |
| Benefits and costs of four approaches to improving rollover stability of cargo tank motor vehicles |
Kate Harback
|
Transportation Research Record |
| Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes |
Cedric Chauve
|
BMC Genomics |
| The evolutionary response of virulence to host heterogeneity: A general model with application to myxomatosis in rabbits co-infected with intestinal helminths |
Benjamin Bolker
|
Aegyptus |
| Human activity determines the presence of integron-associated and antibiotic resistance genes in Southwestern British Columbia |
Natalie Prystajecky
|
Frontiers in Microbiology |
| Seasonally varying predation behavior and climate shifts are predicted to affect predator-prey cycles |
Rebecca Tyson
|
American Naturalist |
| Reply |
Benjamin Bolker
|
Psychotherapy and Psychosomatics |
| Cell-free DNA modification dynamics in abiraterone acetate-treated prostate cancer patients |
Rafal Kustra
|
Clinical Cancer Research |
| Niche separation increases with genetic distance among bloom-forming cyanobacteria |
Jesse Shapiro
|
Frontiers in Microbiology |
| Phenotypic traits and resource quality as factors affecting male reproductive success in a toadfish |
Benjamin Bolker
|
Behavioral Ecology |
| The Relative Contribution of Direct and Environmental Transmission Routes in Stochastic Avian Flu Epidemic Recurrence: An Approximate Analysis |
Rebecca Tyson
|
Bulletin of Mathematical Biology |
| Once Bitten Twice Shy: Thinking Carefully Before Adopting the EQ-5D-5L |
Jeff Round
|
PharmacoEconomics |
| Preface |
Sean Cornelius
|
Springer Proceedings in Complexity |
| Measurement of the single π 0 production rate in neutral current neutrino interactions on water |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Stem cells and beta cell replacement therapy: A prospective health technology assessment study |
Christopher McCabe
|
BMC Endocrine Disorders |
| Using simulation to model and optimize acute care access in relation to hospital bed count and bed distribution |
Alexander Rutherford
|
Journal of Simulation |
| First measurement of the νμ charged-current cross section on a water target without pions in the final state |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Preface |
Sean Cornelius
|
Springer Proceedings in Complexity |
| Game Theoretic Models of Clear versus Plain Speech |
Paul Tupper
|
Proceedings of the 40th Annual Meeting of the Cognitive Science Society, CogSci 2018 |
| Comparative methods for reconstructing ancient genome organization |
Cedric Chauve
|
Methods in Molecular Biology |
| The hefty fetal phenotype hypothesis revisited: High birth weight, type 2 diabetes and gestational diabetes in a Saskatchewan cohort of First Nations and non-First Nations women |
Nathaniel Osgood
|
Journal of Developmental Origins of Health and Disease |
| Phase 1 and pharmacokinetic study of LY3007113, a p38 MAPK inhibitor, in patients with advanced cancer |
Xuekui Zhang
|
Investigational New Drugs |
| Measurement of neutrino and antineutrino oscillations by the T2K experiment including a new additional sample of v<inf>e</inf> interactions at the far detector |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| Age-dependent capillary thinning dynamics of physically-associated salivary mucin networks |
Caroline Wagner
|
Journal of Rheology |
| Effect of human papillomavirus vaccination on cervical cancer screening in Alberta |
Larry Svenson
|
CMAJ |
| Small RNA-mediated regulation of DNA dosage in the ciliate Oxytricha |
Sandrine Moreira
|
RNA |
| Explanation and Elaboration of the Standards of Reporting of Neurological Disorders Checklist: A Guideline for the Reporting of Incidence and Prevalence Studies in Neuroepidemiology |
Larry Svenson
|
Neuroepidemiology |
| A virtual marketplace for goods and services for people with social needs |
Dionne Aleman
|
IHTC 2017 - IEEE Canada International Humanitarian Technology Conference 2017 |
| Measurement of ν¯μ and νμ charged current inclusive cross sections and their ratio with the T2K off-axis near detector |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| A stochastic inverse problem for multiscale models |
Donald Estep
|
International Journal for Multiscale Computational Engineering |
| Healthcare Resource Uses and Out-of-Pocket Expenses Associated with Pulmonary TB Treatment in Thailand |
Jonathan Dushoff
|
PharmacoEconomics - Open |
| The Geography and Scale of Soil-Transmitted Helminth Infections |
Shelby Sturrock
|
Current Tropical Medicine Reports |
| Updated T2K measurements of muon neutrino and antineutrino disappearance using 1.5×1021 protons on target |
Dean Karlen,
Dean Karlen
|
Physical Review D |
| The effects of inhaled and oral corticosteroids on serum inflammatory biomarkers in COPD: An exploratory study |
Xuekui Zhang
|
Therapeutic Advances in Respiratory Disease |
| Collaborative operating room planning and scheduling |
Dionne Aleman
|
INFORMS Journal on Computing |
| Performance of OTR and scintillator view screens for the ARIEL electron linac |
Dean Karlen,
Dean Karlen
|
IPAC 2017 - Proceedings of the 8th International Particle Accelerator Conference |
| The Policy Shop: Innovation, Partnerships and Capacity-building |
Sara McPhee-Knowles
|
Social Change |
| On selection in finite populations |
David Earn
|
Journal of Mathematical Biology |
| Prospective detection of foodborne illness outbreaks using machine learning approaches |
Sara McPhee-Knowles
|
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
| Epidemiology of pertussis in Alberta, Canada 2004-2015 |
Larry Svenson
|
BMC Public Health |
| Incorporating equity in economic evaluations: a multi-attribute equity state approach |
Jeff Round
|
European Journal of Health Economics |
| Statistical Alchemy: Conceptual Validity and Mapping to Generate Health State Utility Values |
Jeff Round
|
PharmacoEconomics - Open |
| Incorporation of delivery times in stereotactic radiosurgery treatment optimization |
Dionne Aleman
|
Journal of Global Optimization |
| Controllability of multiplex, multi-time-scale networks |
Sean Cornelius
|
Physical Review E |
| Promoting independence, health and well-being for older people: A feasibility study of computer-aided health and social risk appraisal system in primary care |
Jeff Round
|
BMC Family Practice |
| Sustained reduction in sexual behavior that may pose a risk of hiv transmission following diagnosis during early hiv infection among gay men in vancouver, british columbia |
Daniel Coombs
|
AIDS and Behavior |
| Cancer incidence and mortality among the Métis population of Alberta, Canada |
Larry Svenson
|
International Journal of Circumpolar Health |
| Progression From No AMD to Intermediate AMD as Influenced by Antioxidant Treatment and Genetic Risk: An Analysis of Data From the Age-Related Eye Disease Study Cataract Trial |
Rafal Kustra
|
Journal of VitreoRetinal Diseases |
| Incorporating periodic variability in hidden Markov models for animal movement |
Michael WZ Li
|
Movement Ecology |
| Novel modes of RNA editing in mitochondria |
Sandrine Moreira
|
Nucleic Acids Research |
| SubtiList: The reference database for the Bacillus subtilis genome |
Sandrine Moreira
|
Nucleic Acids Research |
| Revisiting a two-patch SIS model with infection during transport |
Julien Arino
|
Mathematical Medicine and Biology |
| Weak convergence in the Prokhorov metric of methods for stochastic differential equations |
Paul Tupper
|
IMA Journal of Numerical Analysis |
| Efficient p-value estimation in massively parallel testing problems |
Rafal Kustra
|
Biostatistics |
| EM-random forest and new measures of variable importance for multi-locus quantitative trait linkage analysis |
Rafal Kustra
|
Bioinformatics |
| PING 2.0: An R/Bioconductor package for nucleosome positioning using next-generation sequencing data |
Xuekui Zhang
|
Bioinformatics |
| The senior transportation problem |
Dionne Aleman
|
AAAI Workshop - Technical Report |
| Knowledge-Based provision of goods and services for people with social needs: Towards a virtual marketplace |
Dionne Aleman
|
AAAI Workshop - Technical Report |
| Knowledge-based provisioning of goods and Services: Towards a virtual social needs marketplace |
Dionne Aleman
|
AAAI Spring Symposium - Technical Report |
| BC oysters and norovirus: Hundreds of cases in months with an “r” |
Natalie Prystajecky
|
British Columbia Medical Journal |
| A modeling link between cognitive and biological homeostasis |
Paul Tupper
|
CogSci 2017 - Proceedings of the 39th Annual Meeting of the Cognitive Science Society: Computational Foundations of Cognition |
| Preface - Orcutt’s Vision 50 Years On |
Michael Wolfson
|
New Frontiers in Microsimulation Modelling |
| Robotic path-finding in inverse treatment planning for stereotactic radiosurgery with continuous dose delivery |
Dionne Aleman
|
Medical Physics |
| Modeling stochastic anomalies in an SIS system |
Troy Day
|
Stochastic Analysis and Applications |
| Post-transcriptional mending of gene sequences: Looking under the hood of mitochondrial gene expression in diplonemids |
Sandrine Moreira
|
RNA Biology |
| Toward standardizing a lexicon of infectious disease modeling terms |
Julien Arino
|
Frontiers in Public Health |
| A posteriori error analysis of two-stage computation methods with application to efficient discretization and the parareal algorithm |
Donald Estep
|
SIAM Journal on Numerical Analysis |
| Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE): Epidemiology, emerging organisms, and economics |
Larry Svenson
|
BMC Pediatrics |
| The Population Health Model (POHEM): An overview of rationale, methods and applications |
Michael Wolfson
|
Population Health Metrics |
| Matching models of HIV-1 viral dynamics to clinical data |
Alexander Rutherford
|
2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2015 |
| Aviation infrastructure investment and productivity growth |
Kate Harback
|
AIAA/IEEE Digital Avionics Systems Conference - Proceedings |
| Data-fusion in clustering microarray data: Balancing discovery and interpretability |
Rafal Kustra
|
IEEE/ACM Transactions on Computational Biology and Bioinformatics |
| Opinion strength influences the spatial dynamics of opinion formation |
Rebecca Tyson
|
Journal of Mathematical Sociology |
| A discrete event simulation evaluation of distributed operating room scheduling |
Dionne Aleman
|
IIE Transactions on Healthcare Systems Engineering |
| Live attenuated versus inactivated influenza vaccinein hutterite children a cluster randomized blinded trial |
David Earn
|
Annals of Internal Medicine |
| Exploring Contingent Inequalities: Building the Theoretical Health Inequality Model |
Michael Wolfson
|
Springer Series on Demographic Methods and Population Analysis |
| Airline consolidation |
Kate Harback
|
TR News |
| Evolutionary stability in continuous nonlinear public goods games |
David Earn
|
Journal of Mathematical Biology |
| A comprehensive method for ampliconbased and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples |
Natalie Prystajecky
|
Microbiome |
| Disease eradication on large industrial farms |
Troy Day
|
Journal of Mathematical Biology |
| HPV Vaccine utilization, Alberta 2008/09 - 2013/14 School year |
Larry Svenson
|
BMC Infectious Diseases |
| Mechanistic models for the spatial spread of species under climate change |
Amy Hurford
|
Ecological Applications |
| Profiling of vascular endothelial growth factor receptor heterogeneity identifies protein expression-defined subclasses of human non-small cell lung carcinoma |
Xuekui Zhang
|
Anticancer Research |
| A Dynamic Neural Field Model of Speech Cue Compensation |
Paul Tupper
|
Proceedings of the 38th Annual Meeting of the Cognitive Science Society, CogSci 2016 |
| Which Learning Algorithms Can Generalize Identity-Based Rules to Novel Inputs? |
Paul Tupper
|
Proceedings of the 38th Annual Meeting of the Cognitive Science Society, CogSci 2016 |
| Growing food safety from the bottom up: An agent-based model of food safety inspections |
Sara McPhee-Knowles
|
JASSS |
| A posteriori error estimation for a cut cell finite volume method with uncertain interface location |
Donald Estep
|
International Journal for Uncertainty Quantification |
| Parameter estimation and prediction for groundwater contamination based on measure theory |
Donald Estep
|
Water Resources Research |
| Cost-effectiveness of lung cancer screening in Canada |
Michael Wolfson
|
JAMA Oncology |
| High incidence and increasing prevalence of multiple sclerosis in British Columbia, Canada: findings from over two decades (1991–2010) |
Larry Svenson
|
Journal of Neurology |
| Exemplar dynamics and sound merger in language |
Paul Tupper
|
SIAM Journal on Applied Mathematics |
| Development of the standards of reporting of neurological disorders (STROND) checklist: A guideline for the reporting of incidence and prevalence studies in neuroepidemiology |
Larry Svenson
|
European Journal of Epidemiology |
| A posteriori analysis for iterative solvers for nonautonomous evolution problems |
Donald Estep
|
SIAM-ASA Journal on Uncertainty Quantification |
| On a Perturbation Method for Stochastic Parabolic PDE |
Donald Estep
|
Communications in Mathematics and Statistics |
| Multiple Enzyme Analyzer (MEA): Steps toward the in situ detection of microbial community ectoenzyme activities |
Brian Gaas
|
Limnology and Oceanography: Methods |
| The prevalence of systemic autoimmune rheumatic diseases in Canadian pediatric populations: administrative database estimates |
Larry Svenson
|
Rheumatology International |
| Chronic inflammatory arthritis prevalence estimates for children and adolescents in three Canadian provinces |
Larry Svenson
|
Rheumatology International |
| Optimizing an HIV testing program using a system dynamics model of the continuum of care |
Alexander Rutherford
|
Health Care Management Science |
| The interaction of iteration error and stability for linear partial differential equations coupled through an interface |
Donald Estep
|
Advances in Mathematical Physics |
| Epidemiological implications of mobility between a large urban centre and smaller satellite cities |
Julien Arino
|
Journal of Mathematical Biology |
| Automated high resolution ectoenzyme measurements: Instrument development and deployment in three trophic regimes |
Brian Gaas
|
Limnology and Oceanography: Methods |
| Evaluation of metabolism models for free-water dissolved oxygen methods in lakes |
Sean Cornelius
|
Limnology and Oceanography: Methods |
| Performance of the cancer risk management model lung cancer screening module |
Michael Wolfson
|
Health Reports |
| A dynamic neural field model of self-regulated eye movements during category learning |
Paul Tupper
|
Proceedings of the 37th Annual Meeting of the Cognitive Science Society, CogSci 2015 |
| A posteriori error analysis for finite element methods with projection operators as applied to explicit time integration techniques |
Donald Estep
|
BIT Numerical Mathematics |
| Using varieties of simulation modeling for criminal justice system analysis |
Alexander Rutherford
|
Artificial Crime Analysis Systems: Using Computer Simulations and Geographic Information Systems |
| Modelling the dynamics of invasion and control of competing green crab genotypes |
Lisa Kanary
|
Theoretical Ecology |
| Erratum to Polarization and the decline of the middle class: Canada and the U.S [J Econ Inequal, (2010), 8, (247-273) DOI 10.1007/s10888-009-9122-7] |
Michael Wolfson
|
Journal of Economic Inequality |
| Mathematical Modelling to Evaluate Measures and Control the Spread of Illicit Drug Use |
Alexander Rutherford
|
Mathematics in Industry |
| Diversities and the geometry of hypergraphs |
Paul Tupper
|
Discrete Mathematics and Theoretical Computer Science |
| Exemplar Dynamics Models of the Stability of Phonological Categories |
Paul Tupper
|
Proceedings of the 36th Annual Meeting of the Cognitive Science Society, CogSci 2014 |
| High-Level Simulation Model of a Criminal Justice System |
Alexander Rutherford
|
Intelligent Systems Reference Library |
| Sustainability in airspace system planning |
Kate Harback
|
TR News |
| Developing a patent landscape methodology |
Sara McPhee-Knowles
|
Queen Mary Journal of Intellectual Property |
| Impact of viral mutation on suppression of infection by cytotoxic T lymphocytes |
Julien Arino
|
Canadian Applied Mathematics Quarterly |
| Serum PARC/CCL-18 concentrations and health outcomes in chronic obstructive pulmonary disease |
Xuekui Zhang
|
American Journal of Respiratory and Critical Care Medicine |
| Entry and exit screening of airline travellers during the A(H1N1) 2009 pandemic: A retrospective evaluation |
Julien Arino
|
Bulletin of the World Health Organization |
| A deterministic model of home and community care client counts in British Columbia |
Alexander Rutherford
|
Health Care Management Science |
| Modeling sustainability of Arctic communities: An interdisciplinary collaboration of researchers and local knowledge holders |
Colin Daniel
|
Ecosystems |
| The utility and predictive value of combinations of low penetrance genes for screening and risk prediction of colorectal cancer |
Rafal Kustra
|
Human Genetics |
| A metapopulation model for malaria with transmission-blocking partial immunity in hosts |
Julien Arino
|
Journal of Mathematical Biology |
| Identification and analysis of murine pancreatic islet enhancers |
Xuekui Zhang
|
Diabetologia |
| Canonical correlation analysis based on Hilbert-Schmidt independence criterion and centered Kernel target alignment |
Rafal Kustra
|
30th International Conference on Machine Learning, ICML 2013 |
| Predicting landscape vegetation dynamics using state-and-transition simulation models |
Colin Daniel
|
USDA Forest Service - General Technical Report PNW-GTR |
| Introduction |
Colin Daniel
|
USDA Forest Service - General Technical Report PNW-GTR |
| Dimensional scaling of quenching for flame propagation in random discrete media |
Caroline Wagner
|
Proceedings of the International Astronautical Congress, IAC |
| Sonority and syllabification in a connectionist network: An analysis of BrbrNet |
Paul Tupper
|
The Sonority Controversy |
| Predicting larval dispersal of the vase tunicate Ciona intestinalis in a Prince Edward Island estuary using a matrix population model |
Lisa Kanary
|
Aquatic Invasions |
| Evaluating the effectiveness of SCUBA-based visual searches for an invasive tunicate, Ciona intestinalis, in a Prince Edward Island estuary |
Lisa Kanary
|
Aquatic Invasions |
| The Influence of School Policies on Smoking Prevalence Among Students in Grades 5-9, Canada, 2004-2005 |
Alan Diener
|
Preventing Chronic Disease |
| Bringing an economy-wide perspective to NextGen benefits analysis |
Kate Harback
|
9th AIAA Aviation Technology, Integration and Operations (ATIO) Conference, Aircraft Noise and Emissions Reduction Symposium (ANERS) |
| Continuous-time hidden Markov models for the copy number analysis of genotyping arrays |
Rafal Kustra
|
Proceedings of the IADIS European Conference on Data Mining 2009, ECDM'09 Part of the IADIS Multi Conference on Computer Science and Information Systems, MCCSIS 2009 |
| Exploration of high-dimensional time series using regularized reduced rank approach: Application in time-course microarray data analysis |
Rafal Kustra
|
MCCSIS'08 - IADIS Multi Conference on Computer Science and Information Systems; Proceedings of Informatics 2008 and Data Mining 2008 |
| Analysis of cost at FAA's en route centers: An empirical perspective |
Kate Harback
|
Collection of Technical Papers - 7th AIAA Aviation Technology, Integration, and Operations Conference |
| Analysis of cost at FAA's en route centers: An empirical perspective |
Kate Harback
|
Collection of Technical Papers - 7th AIAA Aviation Technology, Integration, and Operations Conference |